Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SLC52A1Q9NWF4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SLC52A1Q9NWF4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC26.6■■□□□ 1.85
SLC52A1Q9NWF4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SLC52A1Q9NWF4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
SLC52A1Q9NWF4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
SLC52A1Q9NWF4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SLC52A1Q9NWF4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC26.59■■□□□ 1.85
SLC52A1Q9NWF4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC26.59■■□□□ 1.85
SLC52A1Q9NWF4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC26.59■■□□□ 1.85
SLC52A1Q9NWF4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SLC52A1Q9NWF4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC26.59■■□□□ 1.85
SLC52A1Q9NWF4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
SLC52A1Q9NWF4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
SLC52A1Q9NWF4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
SLC52A1Q9NWF4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SLC52A1Q9NWF4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC26.58■■□□□ 1.85
SLC52A1Q9NWF4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC26.58■■□□□ 1.85
SLC52A1Q9NWF4 NFYC-AS1-201ENST00000606277 1687 ntBASIC26.58■■□□□ 1.85
SLC52A1Q9NWF4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SLC52A1Q9NWF4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SLC52A1Q9NWF4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC26.58■■□□□ 1.85
SLC52A1Q9NWF4 RBM17P3-201ENST00000417687 1192 ntBASIC26.58■■□□□ 1.85
SLC52A1Q9NWF4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
SLC52A1Q9NWF4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC26.58■■□□□ 1.85
SLC52A1Q9NWF4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC26.58■■□□□ 1.85
SLC52A1Q9NWF4 AC005336.2-201ENST00000593183 939 ntBASIC26.58■■□□□ 1.85
SLC52A1Q9NWF4 AC008687.5-201ENST00000593746 558 ntBASIC26.58■■□□□ 1.85
SLC52A1Q9NWF4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SLC52A1Q9NWF4 MIR7706-201ENST00000613747 67 ntBASIC26.58■■□□□ 1.85
SLC52A1Q9NWF4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC26.58■■□□□ 1.85
SLC52A1Q9NWF4 MTMR9LP-203ENST00000426597 1545 ntBASIC26.58■■□□□ 1.85
SLC52A1Q9NWF4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC26.58■■□□□ 1.85
SLC52A1Q9NWF4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
SLC52A1Q9NWF4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
SLC52A1Q9NWF4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SLC52A1Q9NWF4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SLC52A1Q9NWF4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
SLC52A1Q9NWF4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SLC52A1Q9NWF4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
SLC52A1Q9NWF4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC26.57■■□□□ 1.84
SLC52A1Q9NWF4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SLC52A1Q9NWF4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SLC52A1Q9NWF4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SLC52A1Q9NWF4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC26.57■■□□□ 1.84
SLC52A1Q9NWF4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC26.57■■□□□ 1.84
SLC52A1Q9NWF4 RCN1P2-201ENST00000398357 915 ntBASIC26.57■■□□□ 1.84
SLC52A1Q9NWF4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC26.57■■□□□ 1.84
SLC52A1Q9NWF4 FGFR3P6-201ENST00000457012 610 ntBASIC26.57■■□□□ 1.84
SLC52A1Q9NWF4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC26.57■■□□□ 1.84
SLC52A1Q9NWF4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SLC52A1Q9NWF4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC26.57■■□□□ 1.84
SLC52A1Q9NWF4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC26.57■■□□□ 1.84
SLC52A1Q9NWF4 AC139887.3-201ENST00000568585 713 ntBASIC26.57■■□□□ 1.84
SLC52A1Q9NWF4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC26.57■■□□□ 1.84
SLC52A1Q9NWF4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC26.57■■□□□ 1.84
SLC52A1Q9NWF4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC26.57■■□□□ 1.84
SLC52A1Q9NWF4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC26.57■■□□□ 1.84
SLC52A1Q9NWF4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SLC52A1Q9NWF4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SLC52A1Q9NWF4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC26.56■■□□□ 1.84
SLC52A1Q9NWF4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SLC52A1Q9NWF4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SLC52A1Q9NWF4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC26.56■■□□□ 1.84
SLC52A1Q9NWF4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SLC52A1Q9NWF4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC26.56■■□□□ 1.84
SLC52A1Q9NWF4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SLC52A1Q9NWF4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC26.56■■□□□ 1.84
SLC52A1Q9NWF4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SLC52A1Q9NWF4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SLC52A1Q9NWF4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC26.56■■□□□ 1.84
SLC52A1Q9NWF4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SLC52A1Q9NWF4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC26.56■■□□□ 1.84
SLC52A1Q9NWF4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC26.56■■□□□ 1.84
SLC52A1Q9NWF4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC26.56■■□□□ 1.84
SLC52A1Q9NWF4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC26.56■■□□□ 1.84
SLC52A1Q9NWF4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
SLC52A1Q9NWF4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
SLC52A1Q9NWF4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SLC52A1Q9NWF4 SCARNA2-201ENST00000458748 420 ntBASIC26.55■■□□□ 1.84
SLC52A1Q9NWF4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC26.55■■□□□ 1.84
SLC52A1Q9NWF4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC26.55■■□□□ 1.84
SLC52A1Q9NWF4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC26.55■■□□□ 1.84
SLC52A1Q9NWF4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SLC52A1Q9NWF4 AL049840.3-201ENST00000602669 611 ntBASIC26.55■■□□□ 1.84
SLC52A1Q9NWF4 FAM215A-202ENST00000632077 792 ntBASIC26.55■■□□□ 1.84
SLC52A1Q9NWF4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
SLC52A1Q9NWF4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SLC52A1Q9NWF4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SLC52A1Q9NWF4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SLC52A1Q9NWF4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SLC52A1Q9NWF4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SLC52A1Q9NWF4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SLC52A1Q9NWF4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC26.54■■□□□ 1.84
SLC52A1Q9NWF4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SLC52A1Q9NWF4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SLC52A1Q9NWF4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
SLC52A1Q9NWF4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SLC52A1Q9NWF4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC26.54■■□□□ 1.84
SLC52A1Q9NWF4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC26.54■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms