Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CISHQ9NSE2 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CISHQ9NSE2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.83■□□□□ 0.77
CISHQ9NSE2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CISHQ9NSE2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CISHQ9NSE2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.83■□□□□ 0.77
CISHQ9NSE2 MYLKP1-201ENST00000509077 1580 ntBASIC19.83■□□□□ 0.77
CISHQ9NSE2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CISHQ9NSE2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CISHQ9NSE2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CISHQ9NSE2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CISHQ9NSE2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CISHQ9NSE2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CISHQ9NSE2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CISHQ9NSE2 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.83■□□□□ 0.77
CISHQ9NSE2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.83■□□□□ 0.77
CISHQ9NSE2 AP000593.1-201ENST00000393668 712 ntBASIC19.83■□□□□ 0.77
CISHQ9NSE2 KRT18P57-201ENST00000443599 1254 ntBASIC19.83■□□□□ 0.77
CISHQ9NSE2 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CISHQ9NSE2 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.83■□□□□ 0.77
CISHQ9NSE2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.83■□□□□ 0.77
CISHQ9NSE2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.83■□□□□ 0.77
CISHQ9NSE2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CISHQ9NSE2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.83■□□□□ 0.77
CISHQ9NSE2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.83■□□□□ 0.77
CISHQ9NSE2 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CISHQ9NSE2 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CISHQ9NSE2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
CISHQ9NSE2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.83■□□□□ 0.76
CISHQ9NSE2 AC005082.1-201ENST00000413042 2259 ntBASIC19.83■□□□□ 0.76
CISHQ9NSE2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CISHQ9NSE2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CISHQ9NSE2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CISHQ9NSE2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CISHQ9NSE2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.83■□□□□ 0.76
CISHQ9NSE2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CISHQ9NSE2 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.82■□□□□ 0.76
CISHQ9NSE2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CISHQ9NSE2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CISHQ9NSE2 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CISHQ9NSE2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CISHQ9NSE2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CISHQ9NSE2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CISHQ9NSE2 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CISHQ9NSE2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CISHQ9NSE2 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.82■□□□□ 0.76
CISHQ9NSE2 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CISHQ9NSE2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.82■□□□□ 0.76
CISHQ9NSE2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.82■□□□□ 0.76
CISHQ9NSE2 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CISHQ9NSE2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.82■□□□□ 0.76
CISHQ9NSE2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CISHQ9NSE2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
CISHQ9NSE2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CISHQ9NSE2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
CISHQ9NSE2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CISHQ9NSE2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CISHQ9NSE2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CISHQ9NSE2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.82■□□□□ 0.76
CISHQ9NSE2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CISHQ9NSE2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.82■□□□□ 0.76
CISHQ9NSE2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
CISHQ9NSE2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CISHQ9NSE2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CISHQ9NSE2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CISHQ9NSE2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CISHQ9NSE2 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CISHQ9NSE2 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CISHQ9NSE2 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.81■□□□□ 0.76
CISHQ9NSE2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CISHQ9NSE2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.81■□□□□ 0.76
CISHQ9NSE2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CISHQ9NSE2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.81■□□□□ 0.76
CISHQ9NSE2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CISHQ9NSE2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CISHQ9NSE2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CISHQ9NSE2 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CISHQ9NSE2 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.81■□□□□ 0.76
CISHQ9NSE2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.81■□□□□ 0.76
CISHQ9NSE2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.81■□□□□ 0.76
CISHQ9NSE2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.81■□□□□ 0.76
CISHQ9NSE2 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
CISHQ9NSE2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.81■□□□□ 0.76
CISHQ9NSE2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.81■□□□□ 0.76
CISHQ9NSE2 AC024243.1-201ENST00000609234 778 ntBASIC19.81■□□□□ 0.76
CISHQ9NSE2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
CISHQ9NSE2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CISHQ9NSE2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CISHQ9NSE2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CISHQ9NSE2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.81■□□□□ 0.76
CISHQ9NSE2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CISHQ9NSE2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CISHQ9NSE2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CISHQ9NSE2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CISHQ9NSE2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CISHQ9NSE2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.8■□□□□ 0.76
CISHQ9NSE2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CISHQ9NSE2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CISHQ9NSE2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.8■□□□□ 0.76
CISHQ9NSE2 AP000523.1-201ENST00000398242 1049 ntBASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms