Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
VPS33BQ9H267 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS33BQ9H267 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS33BQ9H267 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
VPS33BQ9H267 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC22.34■■□□□ 1.17
VPS33BQ9H267 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS33BQ9H267 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
VPS33BQ9H267 AC009533.2-201ENST00000543664 586 ntBASIC22.34■■□□□ 1.17
VPS33BQ9H267 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC22.34■■□□□ 1.17
VPS33BQ9H267 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC22.34■■□□□ 1.17
VPS33BQ9H267 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC22.34■■□□□ 1.17
VPS33BQ9H267 CAND2-206ENST00000626378 333 ntTSL 5 BASIC22.34■■□□□ 1.17
VPS33BQ9H267 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS33BQ9H267 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS33BQ9H267 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS33BQ9H267 TP73-AS1-210ENST00000637775 1455 ntBASIC22.34■■□□□ 1.17
VPS33BQ9H267 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS33BQ9H267 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS33BQ9H267 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
VPS33BQ9H267 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
VPS33BQ9H267 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
VPS33BQ9H267 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC22.33■■□□□ 1.17
VPS33BQ9H267 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
VPS33BQ9H267 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC22.33■■□□□ 1.17
VPS33BQ9H267 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC22.33■■□□□ 1.17
VPS33BQ9H267 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC22.33■■□□□ 1.17
VPS33BQ9H267 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC22.33■■□□□ 1.17
VPS33BQ9H267 AC145285.3-201ENST00000564603 959 ntBASIC22.33■■□□□ 1.17
VPS33BQ9H267 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC22.33■■□□□ 1.17
VPS33BQ9H267 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
VPS33BQ9H267 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
VPS33BQ9H267 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC22.33■■□□□ 1.17
VPS33BQ9H267 AC141586.3-201ENST00000562166 1838 ntBASIC22.33■■□□□ 1.16
VPS33BQ9H267 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
VPS33BQ9H267 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
VPS33BQ9H267 AC112777.1-201ENST00000540175 1423 ntBASIC22.32■■□□□ 1.16
VPS33BQ9H267 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC22.32■■□□□ 1.16
VPS33BQ9H267 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.32■■□□□ 1.16
VPS33BQ9H267 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
VPS33BQ9H267 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
VPS33BQ9H267 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
VPS33BQ9H267 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
VPS33BQ9H267 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
VPS33BQ9H267 AC005336.2-201ENST00000593183 939 ntBASIC22.32■■□□□ 1.16
VPS33BQ9H267 MTDHP3-201ENST00000594186 672 ntBASIC22.32■■□□□ 1.16
VPS33BQ9H267 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC22.32■■□□□ 1.16
VPS33BQ9H267 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC22.32■■□□□ 1.16
VPS33BQ9H267 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
VPS33BQ9H267 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
VPS33BQ9H267 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC22.32■■□□□ 1.16
VPS33BQ9H267 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC22.32■■□□□ 1.16
VPS33BQ9H267 CLDN5-201ENST00000403084 2357 ntBASIC22.32■■□□□ 1.16
VPS33BQ9H267 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
VPS33BQ9H267 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS33BQ9H267 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
VPS33BQ9H267 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS33BQ9H267 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC22.31■■□□□ 1.16
VPS33BQ9H267 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS33BQ9H267 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS33BQ9H267 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
VPS33BQ9H267 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.31■■□□□ 1.16
VPS33BQ9H267 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC22.31■■□□□ 1.16
VPS33BQ9H267 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
VPS33BQ9H267 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS33BQ9H267 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
VPS33BQ9H267 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC22.31■■□□□ 1.16
VPS33BQ9H267 AC068472.1-201ENST00000474589 881 ntBASIC22.31■■□□□ 1.16
VPS33BQ9H267 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC22.31■■□□□ 1.16
VPS33BQ9H267 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC22.31■■□□□ 1.16
VPS33BQ9H267 AL049840.3-201ENST00000602669 611 ntBASIC22.31■■□□□ 1.16
VPS33BQ9H267 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC22.31■■□□□ 1.16
VPS33BQ9H267 AC116407.3-201ENST00000623905 1129 ntBASIC22.31■■□□□ 1.16
VPS33BQ9H267 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS33BQ9H267 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS33BQ9H267 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
VPS33BQ9H267 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS33BQ9H267 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS33BQ9H267 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
VPS33BQ9H267 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC22.3■■□□□ 1.16
VPS33BQ9H267 HEIH-201ENST00000623091 1652 ntBASIC22.3■■□□□ 1.16
VPS33BQ9H267 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
VPS33BQ9H267 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
VPS33BQ9H267 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
VPS33BQ9H267 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS33BQ9H267 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
VPS33BQ9H267 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS33BQ9H267 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS33BQ9H267 HNRNPDP1-201ENST00000439535 754 ntBASIC22.3■■□□□ 1.16
VPS33BQ9H267 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS33BQ9H267 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC22.3■■□□□ 1.16
VPS33BQ9H267 CD63-204ENST00000546939 779 ntTSL 3 BASIC22.3■■□□□ 1.16
VPS33BQ9H267 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC22.3■■□□□ 1.16
VPS33BQ9H267 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC22.3■■□□□ 1.16
VPS33BQ9H267 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
VPS33BQ9H267 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS33BQ9H267 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS33BQ9H267 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC22.3■■□□□ 1.16
VPS33BQ9H267 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
VPS33BQ9H267 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VPS33BQ9H267 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms