Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRDL1Q9BU40 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRDL1Q9BU40 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRDL1Q9BU40 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRDL1Q9BU40 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRDL1Q9BU40 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRDL1Q9BU40 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRDL1Q9BU40 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC14.8□□□□□ -0.04
CHRDL1Q9BU40 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRDL1Q9BU40 KRT8P41-201ENST00000533985 1514 ntBASIC14.8□□□□□ -0.04
CHRDL1Q9BU40 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.8□□□□□ -0.04
CHRDL1Q9BU40 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRDL1Q9BU40 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
CHRDL1Q9BU40 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC14.8□□□□□ -0.04
CHRDL1Q9BU40 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRDL1Q9BU40 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRDL1Q9BU40 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CHRDL1Q9BU40 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRDL1Q9BU40 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CHRDL1Q9BU40 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRDL1Q9BU40 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRDL1Q9BU40 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRDL1Q9BU40 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRDL1Q9BU40 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 NIFKP9-201ENST00000419265 221 ntBASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 AP002982.1-201ENST00000492365 877 ntBASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 Z85996.1-201ENST00000494644 937 ntBASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 AL445675.2-201ENST00000620291 557 ntBASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 AL359736.2-201ENST00000621992 437 ntBASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 FAM197Y4-202ENST00000622692 608 ntBASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CHRDL1Q9BU40 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 PRORSD1P-201ENST00000295112 541 ntBASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 TSPY21P-201ENST00000433481 731 ntBASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 TSPY23P-201ENST00000440136 739 ntBASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 RPS2P4-201ENST00000476944 856 ntBASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRDL1Q9BU40 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms