Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AL139288.1-201ENST00000623748 933 ntBASIC24.75■■□□□ 1.55
ABCA3Q99758 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC24.75■■□□□ 1.55
ABCA3Q99758 TP73-AS1-210ENST00000637775 1455 ntBASIC24.75■■□□□ 1.55
ABCA3Q99758 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
ABCA3Q99758 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC24.74■■□□□ 1.55
ABCA3Q99758 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC24.74■■□□□ 1.55
ABCA3Q99758 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ABCA3Q99758 UBQLN4P1-201ENST00000461599 1801 ntBASIC24.74■■□□□ 1.55
ABCA3Q99758 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC24.74■■□□□ 1.55
ABCA3Q99758 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ABCA3Q99758 RCN1P2-201ENST00000398357 915 ntBASIC24.74■■□□□ 1.55
ABCA3Q99758 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC24.74■■□□□ 1.55
ABCA3Q99758 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC24.74■■□□□ 1.55
ABCA3Q99758 AC092910.1-201ENST00000482027 1129 ntBASIC24.74■■□□□ 1.55
ABCA3Q99758 DHDH-204ENST00000523250 634 ntTSL 5 BASIC24.74■■□□□ 1.55
ABCA3Q99758 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC24.74■■□□□ 1.55
ABCA3Q99758 CAND2-206ENST00000626378 333 ntTSL 5 BASIC24.74■■□□□ 1.55
ABCA3Q99758 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
ABCA3Q99758 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC24.73■■□□□ 1.55
ABCA3Q99758 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
ABCA3Q99758 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
ABCA3Q99758 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
ABCA3Q99758 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
ABCA3Q99758 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC24.73■■□□□ 1.55
ABCA3Q99758 RNA5SP415-201ENST00000517246 115 ntBASIC24.73■■□□□ 1.55
ABCA3Q99758 OR7E14P-202ENST00000530490 1290 ntBASIC24.73■■□□□ 1.55
ABCA3Q99758 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
ABCA3Q99758 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC24.73■■□□□ 1.55
ABCA3Q99758 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC24.73■■□□□ 1.55
ABCA3Q99758 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.73■■□□□ 1.55
ABCA3Q99758 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ABCA3Q99758 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
ABCA3Q99758 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC24.72■■□□□ 1.55
ABCA3Q99758 ALG1L5P-201ENST00000482043 771 ntBASIC24.72■■□□□ 1.55
ABCA3Q99758 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC24.72■■□□□ 1.55
ABCA3Q99758 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC24.72■■□□□ 1.55
ABCA3Q99758 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC24.72■■□□□ 1.55
ABCA3Q99758 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
ABCA3Q99758 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
ABCA3Q99758 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ABCA3Q99758 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
ABCA3Q99758 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ABCA3Q99758 RBSN-204ENST00000449050 903 ntTSL 2 BASIC24.72■■□□□ 1.55
ABCA3Q99758 AC132008.2-207ENST00000454517 770 ntBASIC24.72■■□□□ 1.55
ABCA3Q99758 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC24.72■■□□□ 1.55
ABCA3Q99758 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC24.72■■□□□ 1.55
ABCA3Q99758 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC24.72■■□□□ 1.55
ABCA3Q99758 HEIH-201ENST00000623091 1652 ntBASIC24.72■■□□□ 1.55
ABCA3Q99758 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ABCA3Q99758 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC24.71■■□□□ 1.55
ABCA3Q99758 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ABCA3Q99758 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
ABCA3Q99758 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
ABCA3Q99758 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
ABCA3Q99758 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC24.71■■□□□ 1.55
ABCA3Q99758 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC24.71■■□□□ 1.55
ABCA3Q99758 RPS29-206ENST00000557111 488 ntTSL 2 BASIC24.71■■□□□ 1.55
ABCA3Q99758 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC24.71■■□□□ 1.55
ABCA3Q99758 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC24.71■■□□□ 1.55
ABCA3Q99758 LINC02084-201ENST00000606069 1096 ntBASIC24.71■■□□□ 1.55
ABCA3Q99758 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
ABCA3Q99758 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
ABCA3Q99758 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC24.71■■□□□ 1.55
ABCA3Q99758 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ABCA3Q99758 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
ABCA3Q99758 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ABCA3Q99758 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
ABCA3Q99758 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC24.7■■□□□ 1.55
ABCA3Q99758 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.55
ABCA3Q99758 IRX1P1-201ENST00000438849 1838 ntBASIC24.7■■□□□ 1.55
ABCA3Q99758 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.55
ABCA3Q99758 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC24.7■■□□□ 1.55
ABCA3Q99758 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ABCA3Q99758 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
ABCA3Q99758 RAB17-203ENST00000409576 466 ntTSL 3 BASIC24.7■■□□□ 1.54
ABCA3Q99758 HNRNPA1P28-201ENST00000424481 961 ntBASIC24.7■■□□□ 1.54
ABCA3Q99758 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC24.7■■□□□ 1.54
ABCA3Q99758 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ABCA3Q99758 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ABCA3Q99758 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
ABCA3Q99758 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC24.7■■□□□ 1.54
ABCA3Q99758 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ABCA3Q99758 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC24.7■■□□□ 1.54
ABCA3Q99758 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ABCA3Q99758 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
ABCA3Q99758 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
ABCA3Q99758 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ABCA3Q99758 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ABCA3Q99758 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ABCA3Q99758 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC24.69■■□□□ 1.54
ABCA3Q99758 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC24.69■■□□□ 1.54
ABCA3Q99758 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
ABCA3Q99758 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC24.69■■□□□ 1.54
ABCA3Q99758 AP005117.1-201ENST00000584346 1413 ntBASIC24.69■■□□□ 1.54
ABCA3Q99758 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ABCA3Q99758 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ABCA3Q99758 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC24.69■■□□□ 1.54
ABCA3Q99758 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ABCA3Q99758 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ABCA3Q99758 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC24.69■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms