Protein–RNA interactions for Protein: Q99643

SDHC, Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCQ99643 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SDHCQ99643 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
SDHCQ99643 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SDHCQ99643 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SDHCQ99643 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHCQ99643 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHCQ99643 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHCQ99643 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SDHCQ99643 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SDHCQ99643 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHCQ99643 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHCQ99643 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHCQ99643 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SDHCQ99643 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SDHCQ99643 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SDHCQ99643 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHCQ99643 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SDHCQ99643 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.06■□□□□ 0.16
SDHCQ99643 RCC2P6-201ENST00000526625 1557 ntBASIC16.06■□□□□ 0.16
SDHCQ99643 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SDHCQ99643 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SDHCQ99643 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHCQ99643 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SDHCQ99643 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
SDHCQ99643 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SDHCQ99643 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHCQ99643 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.06■□□□□ 0.16
SDHCQ99643 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SDHCQ99643 AL136116.3-201ENST00000402907 1138 ntBASIC16.06■□□□□ 0.16
SDHCQ99643 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SDHCQ99643 TERF1P5-201ENST00000477545 1207 ntBASIC16.06■□□□□ 0.16
SDHCQ99643 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.06■□□□□ 0.16
SDHCQ99643 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.06■□□□□ 0.16
SDHCQ99643 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SDHCQ99643 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHCQ99643 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SDHCQ99643 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SDHCQ99643 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHCQ99643 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHCQ99643 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.06■□□□□ 0.16
SDHCQ99643 AL096828.2-201ENST00000567259 1965 ntBASIC16.06■□□□□ 0.16
SDHCQ99643 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHCQ99643 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.05■□□□□ 0.16
SDHCQ99643 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHCQ99643 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SDHCQ99643 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHCQ99643 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHCQ99643 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHCQ99643 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.05■□□□□ 0.16
SDHCQ99643 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.05■□□□□ 0.16
SDHCQ99643 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHCQ99643 KRT8P45-201ENST00000414328 1447 ntBASIC16.05■□□□□ 0.16
SDHCQ99643 AC112777.1-201ENST00000540175 1423 ntBASIC16.05■□□□□ 0.16
SDHCQ99643 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHCQ99643 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHCQ99643 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHCQ99643 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.05■□□□□ 0.16
SDHCQ99643 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHCQ99643 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHCQ99643 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHCQ99643 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.05■□□□□ 0.16
SDHCQ99643 UBE2DNL-204ENST00000602536 740 ntBASIC16.05■□□□□ 0.16
SDHCQ99643 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SDHCQ99643 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHCQ99643 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHCQ99643 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHCQ99643 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SDHCQ99643 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHCQ99643 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHCQ99643 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SDHCQ99643 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.05■□□□□ 0.16
SDHCQ99643 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHCQ99643 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.05■□□□□ 0.16
SDHCQ99643 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.05■□□□□ 0.16
SDHCQ99643 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SDHCQ99643 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.05■□□□□ 0.16
SDHCQ99643 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHCQ99643 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SDHCQ99643 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.04■□□□□ 0.16
SDHCQ99643 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.04■□□□□ 0.16
SDHCQ99643 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SDHCQ99643 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SDHCQ99643 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SDHCQ99643 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SDHCQ99643 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.04■□□□□ 0.16
SDHCQ99643 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.04■□□□□ 0.16
SDHCQ99643 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SDHCQ99643 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SDHCQ99643 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SDHCQ99643 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SDHCQ99643 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.04■□□□□ 0.16
SDHCQ99643 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SDHCQ99643 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SDHCQ99643 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
SDHCQ99643 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.04■□□□□ 0.16
SDHCQ99643 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SDHCQ99643 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
SDHCQ99643 MYC-208ENST00000641036 567 ntBASIC16.04■□□□□ 0.16
SDHCQ99643 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SDHCQ99643 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms