Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.61■□□□□ 0.41
COL21A1Q96P44 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL21A1Q96P44 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.61■□□□□ 0.41
COL21A1Q96P44 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.61■□□□□ 0.41
COL21A1Q96P44 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL21A1Q96P44 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL21A1Q96P44 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
COL21A1Q96P44 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL21A1Q96P44 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL21A1Q96P44 AL133373.2-201ENST00000623187 2828 ntBASIC17.6■□□□□ 0.41
COL21A1Q96P44 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL21A1Q96P44 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL21A1Q96P44 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
COL21A1Q96P44 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
COL21A1Q96P44 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.6■□□□□ 0.41
COL21A1Q96P44 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL21A1Q96P44 PRSS44-201ENST00000515154 1146 ntBASIC17.6■□□□□ 0.41
COL21A1Q96P44 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.6■□□□□ 0.41
COL21A1Q96P44 AL355075.4-201ENST00000554988 638 ntBASIC17.6■□□□□ 0.41
COL21A1Q96P44 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL21A1Q96P44 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.6■□□□□ 0.41
COL21A1Q96P44 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.6■□□□□ 0.41
COL21A1Q96P44 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.6■□□□□ 0.41
COL21A1Q96P44 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.6■□□□□ 0.41
COL21A1Q96P44 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.6■□□□□ 0.41
COL21A1Q96P44 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.6■□□□□ 0.41
COL21A1Q96P44 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
COL21A1Q96P44 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL21A1Q96P44 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
COL21A1Q96P44 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL21A1Q96P44 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.6■□□□□ 0.41
COL21A1Q96P44 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL21A1Q96P44 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.6■□□□□ 0.41
COL21A1Q96P44 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL21A1Q96P44 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL21A1Q96P44 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.6■□□□□ 0.41
COL21A1Q96P44 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
COL21A1Q96P44 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL21A1Q96P44 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
COL21A1Q96P44 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL21A1Q96P44 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL21A1Q96P44 BICD1-207ENST00000551848 1962 ntBASIC17.59■□□□□ 0.41
COL21A1Q96P44 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL21A1Q96P44 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
COL21A1Q96P44 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.59■□□□□ 0.41
COL21A1Q96P44 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL21A1Q96P44 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL21A1Q96P44 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL21A1Q96P44 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL21A1Q96P44 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL21A1Q96P44 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL21A1Q96P44 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL21A1Q96P44 KRT8P11-201ENST00000409686 1436 ntBASIC17.59■□□□□ 0.41
COL21A1Q96P44 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.59■□□□□ 0.41
COL21A1Q96P44 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.59■□□□□ 0.41
COL21A1Q96P44 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
COL21A1Q96P44 AC097488.1-201ENST00000507834 756 ntBASIC17.59■□□□□ 0.41
COL21A1Q96P44 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.59■□□□□ 0.41
COL21A1Q96P44 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.59■□□□□ 0.41
COL21A1Q96P44 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL21A1Q96P44 SLC25A1P4-201ENST00000567977 778 ntBASIC17.59■□□□□ 0.41
COL21A1Q96P44 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.59■□□□□ 0.41
COL21A1Q96P44 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
COL21A1Q96P44 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.59■□□□□ 0.41
COL21A1Q96P44 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.59■□□□□ 0.41
COL21A1Q96P44 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
COL21A1Q96P44 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL21A1Q96P44 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL21A1Q96P44 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL21A1Q96P44 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
COL21A1Q96P44 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.59■□□□□ 0.41
COL21A1Q96P44 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
COL21A1Q96P44 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
COL21A1Q96P44 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
COL21A1Q96P44 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL21A1Q96P44 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL21A1Q96P44 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
COL21A1Q96P44 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
COL21A1Q96P44 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL21A1Q96P44 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL21A1Q96P44 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
COL21A1Q96P44 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.58■□□□□ 0.41
COL21A1Q96P44 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL21A1Q96P44 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
COL21A1Q96P44 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL21A1Q96P44 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.58■□□□□ 0.4
COL21A1Q96P44 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.58■□□□□ 0.4
COL21A1Q96P44 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL21A1Q96P44 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL21A1Q96P44 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.58■□□□□ 0.4
COL21A1Q96P44 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
COL21A1Q96P44 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.58■□□□□ 0.4
COL21A1Q96P44 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.58■□□□□ 0.4
COL21A1Q96P44 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.58■□□□□ 0.4
COL21A1Q96P44 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL21A1Q96P44 NOC2LP2-201ENST00000407594 1944 ntBASIC17.58■□□□□ 0.4
COL21A1Q96P44 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL21A1Q96P44 AL354751.1-201ENST00000412768 1863 ntBASIC17.58■□□□□ 0.4
COL21A1Q96P44 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.58■□□□□ 0.4
COL21A1Q96P44 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms