Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CLDN23Q96B33 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.55■□□□□ 0.56
CLDN23Q96B33 IGHV3-22-201ENST00000520721 359 ntBASIC18.55■□□□□ 0.56
CLDN23Q96B33 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CLDN23Q96B33 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.55■□□□□ 0.56
CLDN23Q96B33 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.55■□□□□ 0.56
CLDN23Q96B33 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.55■□□□□ 0.56
CLDN23Q96B33 AL691403.2-201ENST00000618460 490 ntBASIC18.55■□□□□ 0.56
CLDN23Q96B33 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.55■□□□□ 0.56
CLDN23Q96B33 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.55■□□□□ 0.56
CLDN23Q96B33 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN23Q96B33 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.55■□□□□ 0.56
CLDN23Q96B33 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN23Q96B33 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN23Q96B33 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN23Q96B33 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN23Q96B33 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN23Q96B33 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN23Q96B33 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN23Q96B33 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN23Q96B33 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN23Q96B33 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CLDN23Q96B33 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN23Q96B33 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN23Q96B33 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN23Q96B33 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN23Q96B33 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.54■□□□□ 0.56
CLDN23Q96B33 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLDN23Q96B33 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.54■□□□□ 0.56
CLDN23Q96B33 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.54■□□□□ 0.56
CLDN23Q96B33 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.54■□□□□ 0.56
CLDN23Q96B33 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN23Q96B33 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.54■□□□□ 0.56
CLDN23Q96B33 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.54■□□□□ 0.56
CLDN23Q96B33 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN23Q96B33 AC027601.4-201ENST00000611259 610 ntBASIC18.54■□□□□ 0.56
CLDN23Q96B33 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.54■□□□□ 0.56
CLDN23Q96B33 AC055717.3-201ENST00000622967 595 ntBASIC18.54■□□□□ 0.56
CLDN23Q96B33 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CLDN23Q96B33 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN23Q96B33 KRT8P50-201ENST00000562022 1438 ntBASIC18.54■□□□□ 0.56
CLDN23Q96B33 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN23Q96B33 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN23Q96B33 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN23Q96B33 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN23Q96B33 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN23Q96B33 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.53■□□□□ 0.56
CLDN23Q96B33 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN23Q96B33 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN23Q96B33 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.53■□□□□ 0.56
CLDN23Q96B33 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.53■□□□□ 0.56
CLDN23Q96B33 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN23Q96B33 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN23Q96B33 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN23Q96B33 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN23Q96B33 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN23Q96B33 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.53■□□□□ 0.56
CLDN23Q96B33 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CLDN23Q96B33 AC113404.2-201ENST00000507884 177 ntBASIC18.53■□□□□ 0.56
CLDN23Q96B33 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.53■□□□□ 0.56
CLDN23Q96B33 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.53■□□□□ 0.56
CLDN23Q96B33 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN23Q96B33 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.53■□□□□ 0.56
CLDN23Q96B33 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.53■□□□□ 0.56
CLDN23Q96B33 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN23Q96B33 AC005336.2-201ENST00000593183 939 ntBASIC18.53■□□□□ 0.56
CLDN23Q96B33 FAM197Y3-203ENST00000618346 717 ntBASIC18.53■□□□□ 0.56
CLDN23Q96B33 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN23Q96B33 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN23Q96B33 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN23Q96B33 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN23Q96B33 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN23Q96B33 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN23Q96B33 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN23Q96B33 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN23Q96B33 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CLDN23Q96B33 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
CLDN23Q96B33 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CLDN23Q96B33 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN23Q96B33 CLDN5-201ENST00000403084 2357 ntBASIC18.52■□□□□ 0.56
CLDN23Q96B33 AL357033.4-201ENST00000617703 1807 ntBASIC18.52■□□□□ 0.56
CLDN23Q96B33 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN23Q96B33 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN23Q96B33 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.52■□□□□ 0.56
CLDN23Q96B33 UPF3AP3-201ENST00000420996 769 ntBASIC18.52■□□□□ 0.56
CLDN23Q96B33 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.52■□□□□ 0.56
CLDN23Q96B33 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN23Q96B33 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN23Q96B33 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.52■□□□□ 0.56
CLDN23Q96B33 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.52■□□□□ 0.56
CLDN23Q96B33 AP001269.4-201ENST00000609611 512 ntBASIC18.52■□□□□ 0.56
CLDN23Q96B33 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN23Q96B33 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN23Q96B33 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN23Q96B33 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.56
CLDN23Q96B33 Z98044.1-201ENST00000632503 1764 ntBASIC18.52■□□□□ 0.55
CLDN23Q96B33 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN23Q96B33 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN23Q96B33 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN23Q96B33 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms