Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPGEF4Q8WZA2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
RAPGEF4Q8WZA2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPGEF4Q8WZA2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPGEF4Q8WZA2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPGEF4Q8WZA2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPGEF4Q8WZA2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC24.38■■□□□ 1.49
RAPGEF4Q8WZA2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
RAPGEF4Q8WZA2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RAPGEF4Q8WZA2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RAPGEF4Q8WZA2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC24.37■■□□□ 1.49
RAPGEF4Q8WZA2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RAPGEF4Q8WZA2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RAPGEF4Q8WZA2 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RAPGEF4Q8WZA2 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
RAPGEF4Q8WZA2 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RAPGEF4Q8WZA2 NUS1P2-201ENST00000417358 873 ntBASIC24.37■■□□□ 1.49
RAPGEF4Q8WZA2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC24.37■■□□□ 1.49
RAPGEF4Q8WZA2 AC091607.1-201ENST00000490318 1060 ntBASIC24.37■■□□□ 1.49
RAPGEF4Q8WZA2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC24.37■■□□□ 1.49
RAPGEF4Q8WZA2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RAPGEF4Q8WZA2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC24.37■■□□□ 1.49
RAPGEF4Q8WZA2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RAPGEF4Q8WZA2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC24.37■■□□□ 1.49
RAPGEF4Q8WZA2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RAPGEF4Q8WZA2 AL357033.4-201ENST00000617703 1807 ntBASIC24.37■■□□□ 1.49
RAPGEF4Q8WZA2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC24.37■■□□□ 1.49
RAPGEF4Q8WZA2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RAPGEF4Q8WZA2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RAPGEF4Q8WZA2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
RAPGEF4Q8WZA2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RAPGEF4Q8WZA2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RAPGEF4Q8WZA2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RAPGEF4Q8WZA2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC24.36■■□□□ 1.49
RAPGEF4Q8WZA2 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
RAPGEF4Q8WZA2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
RAPGEF4Q8WZA2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC24.36■■□□□ 1.49
RAPGEF4Q8WZA2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
RAPGEF4Q8WZA2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC24.36■■□□□ 1.49
RAPGEF4Q8WZA2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
RAPGEF4Q8WZA2 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC24.36■■□□□ 1.49
RAPGEF4Q8WZA2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC24.36■■□□□ 1.49
RAPGEF4Q8WZA2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC24.36■■□□□ 1.49
RAPGEF4Q8WZA2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RAPGEF4Q8WZA2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC24.36■■□□□ 1.49
RAPGEF4Q8WZA2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC24.36■■□□□ 1.49
RAPGEF4Q8WZA2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC24.36■■□□□ 1.49
RAPGEF4Q8WZA2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC24.36■■□□□ 1.49
RAPGEF4Q8WZA2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RAPGEF4Q8WZA2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
RAPGEF4Q8WZA2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 HEIH-201ENST00000623091 1652 ntBASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 SAPCD2P3-201ENST00000455031 850 ntBASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 AC011840.4-201ENST00000578471 627 ntBASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 REXO1L6P-202ENST00000619970 1078 ntBASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 AL158211.5-201ENST00000623583 2518 ntBASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RAPGEF4Q8WZA2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RAPGEF4Q8WZA2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RAPGEF4Q8WZA2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC24.34■■□□□ 1.49
RAPGEF4Q8WZA2 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RAPGEF4Q8WZA2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RAPGEF4Q8WZA2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
RAPGEF4Q8WZA2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC24.34■■□□□ 1.49
RAPGEF4Q8WZA2 MINOS1P3-201ENST00000457048 203 ntBASIC24.34■■□□□ 1.49
RAPGEF4Q8WZA2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC24.34■■□□□ 1.49
RAPGEF4Q8WZA2 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC24.34■■□□□ 1.49
RAPGEF4Q8WZA2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC24.34■■□□□ 1.49
RAPGEF4Q8WZA2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC24.34■■□□□ 1.49
RAPGEF4Q8WZA2 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RAPGEF4Q8WZA2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RAPGEF4Q8WZA2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RAPGEF4Q8WZA2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RAPGEF4Q8WZA2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
RAPGEF4Q8WZA2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RAPGEF4Q8WZA2 CLDN5-201ENST00000403084 2357 ntBASIC24.34■■□□□ 1.49
RAPGEF4Q8WZA2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RAPGEF4Q8WZA2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
RAPGEF4Q8WZA2 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RAPGEF4Q8WZA2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms