Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTCD2Q8WV60 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTCD2Q8WV60 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTCD2Q8WV60 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PTCD2Q8WV60 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.85■□□□□ 0.61
PTCD2Q8WV60 AL023803.3-201ENST00000615559 522 ntBASIC18.85■□□□□ 0.61
PTCD2Q8WV60 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC18.85■□□□□ 0.61
PTCD2Q8WV60 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PTCD2Q8WV60 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTCD2Q8WV60 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTCD2Q8WV60 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.85■□□□□ 0.61
PTCD2Q8WV60 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PTCD2Q8WV60 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.85■□□□□ 0.61
PTCD2Q8WV60 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTCD2Q8WV60 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTCD2Q8WV60 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.85■□□□□ 0.61
PTCD2Q8WV60 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
PTCD2Q8WV60 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTCD2Q8WV60 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTCD2Q8WV60 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTCD2Q8WV60 KRT8P45-201ENST00000414328 1447 ntBASIC18.84■□□□□ 0.61
PTCD2Q8WV60 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTCD2Q8WV60 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.84■□□□□ 0.61
PTCD2Q8WV60 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.84■□□□□ 0.61
PTCD2Q8WV60 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PTCD2Q8WV60 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PTCD2Q8WV60 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTCD2Q8WV60 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTCD2Q8WV60 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTCD2Q8WV60 CA15P1-201ENST00000481698 905 ntBASIC18.84■□□□□ 0.61
PTCD2Q8WV60 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.84■□□□□ 0.61
PTCD2Q8WV60 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.84■□□□□ 0.61
PTCD2Q8WV60 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.84■□□□□ 0.61
PTCD2Q8WV60 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.84■□□□□ 0.61
PTCD2Q8WV60 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.84■□□□□ 0.61
PTCD2Q8WV60 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTCD2Q8WV60 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.84■□□□□ 0.61
PTCD2Q8WV60 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTCD2Q8WV60 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTCD2Q8WV60 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTCD2Q8WV60 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PTCD2Q8WV60 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
PTCD2Q8WV60 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTCD2Q8WV60 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTCD2Q8WV60 AL357033.4-201ENST00000617703 1807 ntBASIC18.84■□□□□ 0.61
PTCD2Q8WV60 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTCD2Q8WV60 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTCD2Q8WV60 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PTCD2Q8WV60 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PTCD2Q8WV60 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTCD2Q8WV60 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.83■□□□□ 0.6
PTCD2Q8WV60 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PTCD2Q8WV60 MIR1224-201ENST00000408193 85 ntBASIC18.83■□□□□ 0.6
PTCD2Q8WV60 AC007663.1-201ENST00000438948 1240 ntBASIC18.83■□□□□ 0.6
PTCD2Q8WV60 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.83■□□□□ 0.6
PTCD2Q8WV60 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTCD2Q8WV60 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTCD2Q8WV60 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTCD2Q8WV60 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTCD2Q8WV60 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.83■□□□□ 0.6
PTCD2Q8WV60 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTCD2Q8WV60 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.83■□□□□ 0.6
PTCD2Q8WV60 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
PTCD2Q8WV60 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTCD2Q8WV60 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTCD2Q8WV60 AC104581.1-202ENST00000635932 2618 ntBASIC18.83■□□□□ 0.6
PTCD2Q8WV60 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTCD2Q8WV60 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.83■□□□□ 0.6
PTCD2Q8WV60 AC092338.2-201ENST00000568827 1415 ntBASIC18.83■□□□□ 0.6
PTCD2Q8WV60 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTCD2Q8WV60 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTCD2Q8WV60 AC135050.7-201ENST00000624508 2218 ntBASIC18.82■□□□□ 0.6
PTCD2Q8WV60 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTCD2Q8WV60 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTCD2Q8WV60 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.82■□□□□ 0.6
PTCD2Q8WV60 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTCD2Q8WV60 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
PTCD2Q8WV60 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTCD2Q8WV60 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.82■□□□□ 0.6
PTCD2Q8WV60 AL137013.1-201ENST00000432946 1228 ntBASIC18.82■□□□□ 0.6
PTCD2Q8WV60 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.82■□□□□ 0.6
PTCD2Q8WV60 KRT18P41-201ENST00000518924 1277 ntBASIC18.82■□□□□ 0.6
PTCD2Q8WV60 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.82■□□□□ 0.6
PTCD2Q8WV60 AC010331.1-201ENST00000611423 582 ntBASIC18.82■□□□□ 0.6
PTCD2Q8WV60 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.82■□□□□ 0.6
PTCD2Q8WV60 AC092865.7-201ENST00000641832 219 ntBASIC18.82■□□□□ 0.6
PTCD2Q8WV60 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTCD2Q8WV60 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTCD2Q8WV60 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.82■□□□□ 0.6
PTCD2Q8WV60 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
PTCD2Q8WV60 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTCD2Q8WV60 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTCD2Q8WV60 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCD2Q8WV60 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCD2Q8WV60 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCD2Q8WV60 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.81■□□□□ 0.6
PTCD2Q8WV60 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCD2Q8WV60 BICD1-207ENST00000551848 1962 ntBASIC18.81■□□□□ 0.6
PTCD2Q8WV60 NEFHP1-201ENST00000412845 2629 ntBASIC18.81■□□□□ 0.6
PTCD2Q8WV60 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms