Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SMC5Q8IY18 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SMC5Q8IY18 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC23.05■■□□□ 1.28
SMC5Q8IY18 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SMC5Q8IY18 AC036111.1-201ENST00000533973 1582 ntBASIC23.05■■□□□ 1.28
SMC5Q8IY18 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
SMC5Q8IY18 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC23.05■■□□□ 1.28
SMC5Q8IY18 POR-209ENST00000439269 1858 ntTSL 2 BASIC23.05■■□□□ 1.28
SMC5Q8IY18 PXK-206ENST00000463280 2825 ntTSL 2 BASIC23.04■■□□□ 1.28
SMC5Q8IY18 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC23.04■■□□□ 1.28
SMC5Q8IY18 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC23.04■■□□□ 1.28
SMC5Q8IY18 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SMC5Q8IY18 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMC5Q8IY18 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.04■■□□□ 1.28
SMC5Q8IY18 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMC5Q8IY18 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMC5Q8IY18 TSPY7P-201ENST00000431358 1114 ntBASIC23.04■■□□□ 1.28
SMC5Q8IY18 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMC5Q8IY18 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC23.04■■□□□ 1.28
SMC5Q8IY18 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC23.04■■□□□ 1.28
SMC5Q8IY18 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
SMC5Q8IY18 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC23.04■■□□□ 1.28
SMC5Q8IY18 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SMC5Q8IY18 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMC5Q8IY18 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMC5Q8IY18 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SMC5Q8IY18 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMC5Q8IY18 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMC5Q8IY18 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SMC5Q8IY18 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC23.04■■□□□ 1.28
SMC5Q8IY18 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMC5Q8IY18 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
SMC5Q8IY18 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
SMC5Q8IY18 FLYWCH1P1-201ENST00000460917 1874 ntBASIC23.03■■□□□ 1.28
SMC5Q8IY18 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SMC5Q8IY18 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMC5Q8IY18 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMC5Q8IY18 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.03■■□□□ 1.28
SMC5Q8IY18 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.03■■□□□ 1.28
SMC5Q8IY18 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC23.03■■□□□ 1.28
SMC5Q8IY18 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC23.03■■□□□ 1.28
SMC5Q8IY18 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMC5Q8IY18 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
SMC5Q8IY18 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SMC5Q8IY18 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMC5Q8IY18 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMC5Q8IY18 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC23.03■■□□□ 1.28
SMC5Q8IY18 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC23.03■■□□□ 1.28
SMC5Q8IY18 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMC5Q8IY18 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
SMC5Q8IY18 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMC5Q8IY18 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMC5Q8IY18 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC23.03■■□□□ 1.28
SMC5Q8IY18 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SMC5Q8IY18 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC23.02■■□□□ 1.28
SMC5Q8IY18 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
SMC5Q8IY18 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMC5Q8IY18 AC008764.6-201ENST00000595909 2069 ntBASIC23.02■■□□□ 1.28
SMC5Q8IY18 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SMC5Q8IY18 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMC5Q8IY18 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
SMC5Q8IY18 AC092338.2-201ENST00000568827 1415 ntBASIC23.02■■□□□ 1.28
SMC5Q8IY18 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC23.02■■□□□ 1.28
SMC5Q8IY18 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMC5Q8IY18 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.02■■□□□ 1.28
SMC5Q8IY18 SLC25A1P2-201ENST00000430693 912 ntBASIC23.02■■□□□ 1.28
SMC5Q8IY18 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC23.02■■□□□ 1.28
SMC5Q8IY18 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC23.02■■□□□ 1.28
SMC5Q8IY18 FITM1-202ENST00000559294 800 ntBASIC23.02■■□□□ 1.28
SMC5Q8IY18 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.02■■□□□ 1.28
SMC5Q8IY18 AL353719.1-201ENST00000566847 864 ntBASIC23.02■■□□□ 1.28
SMC5Q8IY18 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMC5Q8IY18 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMC5Q8IY18 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMC5Q8IY18 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SMC5Q8IY18 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMC5Q8IY18 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SMC5Q8IY18 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SMC5Q8IY18 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMC5Q8IY18 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC23.02■■□□□ 1.28
SMC5Q8IY18 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMC5Q8IY18 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC23.02■■□□□ 1.27
SMC5Q8IY18 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMC5Q8IY18 HOXB1-202ENST00000577092 1414 ntBASIC23.01■■□□□ 1.27
SMC5Q8IY18 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMC5Q8IY18 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMC5Q8IY18 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SMC5Q8IY18 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC23.01■■□□□ 1.27
SMC5Q8IY18 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC23.01■■□□□ 1.27
SMC5Q8IY18 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC23.01■■□□□ 1.27
SMC5Q8IY18 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SMC5Q8IY18 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMC5Q8IY18 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMC5Q8IY18 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC23.01■■□□□ 1.27
SMC5Q8IY18 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC23.01■■□□□ 1.27
SMC5Q8IY18 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
SMC5Q8IY18 AP003041.3-201ENST00000527151 707 ntBASIC23.01■■□□□ 1.27
SMC5Q8IY18 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC23.01■■□□□ 1.27
SMC5Q8IY18 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
SMC5Q8IY18 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms