Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD3Q7Z407 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CSMD3Q7Z407 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSMD3Q7Z407 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSMD3Q7Z407 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSMD3Q7Z407 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CSMD3Q7Z407 AL355877.3-201ENST00000622820 899 ntBASIC12.92□□□□□ -0.34
CSMD3Q7Z407 LINC01521-201ENST00000504184 1943 ntBASIC12.92□□□□□ -0.34
CSMD3Q7Z407 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC12.92□□□□□ -0.34
CSMD3Q7Z407 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
CSMD3Q7Z407 MINOS1P3-201ENST00000457048 203 ntBASIC12.92□□□□□ -0.34
CSMD3Q7Z407 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC12.92□□□□□ -0.34
CSMD3Q7Z407 SART3-203ENST00000546611 1184 ntBASIC12.92□□□□□ -0.34
CSMD3Q7Z407 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.92□□□□□ -0.34
CSMD3Q7Z407 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.92□□□□□ -0.34
CSMD3Q7Z407 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC12.92□□□□□ -0.34
CSMD3Q7Z407 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CSMD3Q7Z407 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSMD3Q7Z407 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC12.92□□□□□ -0.34
CSMD3Q7Z407 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSMD3Q7Z407 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC12.92□□□□□ -0.34
CSMD3Q7Z407 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CSMD3Q7Z407 AC211486.1-202ENST00000416371 468 ntBASIC12.92□□□□□ -0.34
CSMD3Q7Z407 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC12.92□□□□□ -0.34
CSMD3Q7Z407 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC12.92□□□□□ -0.34
CSMD3Q7Z407 AC211476.1-201ENST00000503899 468 ntBASIC12.92□□□□□ -0.34
CSMD3Q7Z407 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.92□□□□□ -0.34
CSMD3Q7Z407 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CSMD3Q7Z407 AC025062.2-201ENST00000605477 670 ntBASIC12.92□□□□□ -0.34
CSMD3Q7Z407 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC12.92□□□□□ -0.34
CSMD3Q7Z407 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC12.92□□□□□ -0.34
CSMD3Q7Z407 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSMD3Q7Z407 AC104109.2-201ENST00000602919 1418 ntBASIC12.91□□□□□ -0.34
CSMD3Q7Z407 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 AP001269.4-201ENST00000609611 512 ntBASIC12.91□□□□□ -0.34
CSMD3Q7Z407 IGHV3-41-201ENST00000613121 348 ntBASIC12.91□□□□□ -0.34
CSMD3Q7Z407 AC006333.2-201ENST00000607957 2099 ntBASIC12.91□□□□□ -0.34
CSMD3Q7Z407 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 AC024563.2-201ENST00000603282 481 ntBASIC12.91□□□□□ -0.34
CSMD3Q7Z407 FAM197Y3-203ENST00000618346 717 ntBASIC12.91□□□□□ -0.34
CSMD3Q7Z407 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD3Q7Z407 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CSMD3Q7Z407 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD3Q7Z407 AP006288.1-201ENST00000446065 395 ntBASIC12.9□□□□□ -0.34
CSMD3Q7Z407 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
CSMD3Q7Z407 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CSMD3Q7Z407 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC12.9□□□□□ -0.34
CSMD3Q7Z407 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD3Q7Z407 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC12.9□□□□□ -0.34
CSMD3Q7Z407 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD3Q7Z407 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD3Q7Z407 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD3Q7Z407 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CSMD3Q7Z407 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD3Q7Z407 SCARNA2-201ENST00000458748 420 ntBASIC12.9□□□□□ -0.34
CSMD3Q7Z407 RN7SL606P-201ENST00000472779 293 ntBASIC12.9□□□□□ -0.34
CSMD3Q7Z407 RFPL4AP1-201ENST00000530883 850 ntBASIC12.9□□□□□ -0.34
CSMD3Q7Z407 RCC2P3-201ENST00000418112 1537 ntBASIC12.9□□□□□ -0.34
CSMD3Q7Z407 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC12.9□□□□□ -0.34
CSMD3Q7Z407 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC12.9□□□□□ -0.34
CSMD3Q7Z407 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
CSMD3Q7Z407 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms