Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 AC009065.1-201ENST00000564055 1225 ntBASIC19.86■□□□□ 0.77
DCLRE1AQ6PJP8 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
DCLRE1AQ6PJP8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.86■□□□□ 0.77
DCLRE1AQ6PJP8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.86■□□□□ 0.77
DCLRE1AQ6PJP8 AC083906.6-201ENST00000641366 219 ntBASIC19.86■□□□□ 0.77
DCLRE1AQ6PJP8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DCLRE1AQ6PJP8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DCLRE1AQ6PJP8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DCLRE1AQ6PJP8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.86■□□□□ 0.77
DCLRE1AQ6PJP8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
DCLRE1AQ6PJP8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
DCLRE1AQ6PJP8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.86■□□□□ 0.77
DCLRE1AQ6PJP8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DCLRE1AQ6PJP8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DCLRE1AQ6PJP8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DCLRE1AQ6PJP8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DCLRE1AQ6PJP8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
DCLRE1AQ6PJP8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
DCLRE1AQ6PJP8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DCLRE1AQ6PJP8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
DCLRE1AQ6PJP8 AP000593.1-201ENST00000393668 712 ntBASIC19.84■□□□□ 0.77
DCLRE1AQ6PJP8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.84■□□□□ 0.77
DCLRE1AQ6PJP8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.84■□□□□ 0.77
DCLRE1AQ6PJP8 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.84■□□□□ 0.77
DCLRE1AQ6PJP8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.84■□□□□ 0.77
DCLRE1AQ6PJP8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.84■□□□□ 0.77
DCLRE1AQ6PJP8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.84■□□□□ 0.77
DCLRE1AQ6PJP8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.84■□□□□ 0.77
DCLRE1AQ6PJP8 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DCLRE1AQ6PJP8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
DCLRE1AQ6PJP8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DCLRE1AQ6PJP8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DCLRE1AQ6PJP8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
DCLRE1AQ6PJP8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.84■□□□□ 0.77
DCLRE1AQ6PJP8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.84■□□□□ 0.77
DCLRE1AQ6PJP8 KRT8P50-201ENST00000562022 1438 ntBASIC19.84■□□□□ 0.77
DCLRE1AQ6PJP8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.83■□□□□ 0.77
DCLRE1AQ6PJP8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
DCLRE1AQ6PJP8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DCLRE1AQ6PJP8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
DCLRE1AQ6PJP8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DCLRE1AQ6PJP8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.83■□□□□ 0.77
DCLRE1AQ6PJP8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DCLRE1AQ6PJP8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.83■□□□□ 0.77
DCLRE1AQ6PJP8 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
DCLRE1AQ6PJP8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DCLRE1AQ6PJP8 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
DCLRE1AQ6PJP8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
DCLRE1AQ6PJP8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DCLRE1AQ6PJP8 TSPY22P-201ENST00000427496 604 ntBASIC19.83■□□□□ 0.77
DCLRE1AQ6PJP8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DCLRE1AQ6PJP8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.83■□□□□ 0.77
DCLRE1AQ6PJP8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.83■□□□□ 0.77
DCLRE1AQ6PJP8 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.83■□□□□ 0.77
DCLRE1AQ6PJP8 RNF126P1-202ENST00000569893 925 ntBASIC19.83■□□□□ 0.77
DCLRE1AQ6PJP8 AC092119.3-201ENST00000612618 583 ntBASIC19.83■□□□□ 0.77
DCLRE1AQ6PJP8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DCLRE1AQ6PJP8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.83■□□□□ 0.76
DCLRE1AQ6PJP8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DCLRE1AQ6PJP8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DCLRE1AQ6PJP8 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
DCLRE1AQ6PJP8 AL049812.1-201ENST00000432563 2267 ntBASIC19.83■□□□□ 0.76
DCLRE1AQ6PJP8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DCLRE1AQ6PJP8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.83■□□□□ 0.76
DCLRE1AQ6PJP8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DCLRE1AQ6PJP8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.83■□□□□ 0.76
DCLRE1AQ6PJP8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
DCLRE1AQ6PJP8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DCLRE1AQ6PJP8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
DCLRE1AQ6PJP8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms