Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 AC148477.8-201ENST00000624298 468 ntBASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNKSR3Q6P9H4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.98■□□□□ 0.79
CNKSR3Q6P9H4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.98■□□□□ 0.79
CNKSR3Q6P9H4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.98■□□□□ 0.79
CNKSR3Q6P9H4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNKSR3Q6P9H4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNKSR3Q6P9H4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.98■□□□□ 0.79
CNKSR3Q6P9H4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.98■□□□□ 0.79
CNKSR3Q6P9H4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CNKSR3Q6P9H4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNKSR3Q6P9H4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.98■□□□□ 0.79
CNKSR3Q6P9H4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.98■□□□□ 0.79
CNKSR3Q6P9H4 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.98■□□□□ 0.79
CNKSR3Q6P9H4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNKSR3Q6P9H4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.98■□□□□ 0.79
CNKSR3Q6P9H4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CNKSR3Q6P9H4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNKSR3Q6P9H4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.98■□□□□ 0.79
CNKSR3Q6P9H4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNKSR3Q6P9H4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNKSR3Q6P9H4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.97■□□□□ 0.79
CNKSR3Q6P9H4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.97■□□□□ 0.79
CNKSR3Q6P9H4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.97■□□□□ 0.79
CNKSR3Q6P9H4 AC141586.3-201ENST00000562166 1838 ntBASIC19.97■□□□□ 0.79
CNKSR3Q6P9H4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNKSR3Q6P9H4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.97■□□□□ 0.79
CNKSR3Q6P9H4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CNKSR3Q6P9H4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNKSR3Q6P9H4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNKSR3Q6P9H4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNKSR3Q6P9H4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CNKSR3Q6P9H4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CNKSR3Q6P9H4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CNKSR3Q6P9H4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.97■□□□□ 0.79
CNKSR3Q6P9H4 AC132008.2-207ENST00000454517 770 ntBASIC19.97■□□□□ 0.79
CNKSR3Q6P9H4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.97■□□□□ 0.79
CNKSR3Q6P9H4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.97■□□□□ 0.79
CNKSR3Q6P9H4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.97■□□□□ 0.79
CNKSR3Q6P9H4 AC106730.1-201ENST00000566722 1090 ntBASIC19.97■□□□□ 0.79
CNKSR3Q6P9H4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CNKSR3Q6P9H4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNKSR3Q6P9H4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNKSR3Q6P9H4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNKSR3Q6P9H4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNKSR3Q6P9H4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.97■□□□□ 0.79
CNKSR3Q6P9H4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNKSR3Q6P9H4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.96■□□□□ 0.79
CNKSR3Q6P9H4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CNKSR3Q6P9H4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNKSR3Q6P9H4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNKSR3Q6P9H4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNKSR3Q6P9H4 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.96■□□□□ 0.79
CNKSR3Q6P9H4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNKSR3Q6P9H4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.96■□□□□ 0.79
CNKSR3Q6P9H4 AC018712.1-201ENST00000455767 687 ntBASIC19.96■□□□□ 0.79
CNKSR3Q6P9H4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.96■□□□□ 0.79
CNKSR3Q6P9H4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.96■□□□□ 0.79
CNKSR3Q6P9H4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNKSR3Q6P9H4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.96■□□□□ 0.79
CNKSR3Q6P9H4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNKSR3Q6P9H4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.96■□□□□ 0.79
CNKSR3Q6P9H4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNKSR3Q6P9H4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNKSR3Q6P9H4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CNKSR3Q6P9H4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNKSR3Q6P9H4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNKSR3Q6P9H4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.96■□□□□ 0.79
CNKSR3Q6P9H4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.96■□□□□ 0.79
CNKSR3Q6P9H4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.96■□□□□ 0.79
CNKSR3Q6P9H4 AL163051.1-201ENST00000569214 1512 ntBASIC19.96■□□□□ 0.79
CNKSR3Q6P9H4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNKSR3Q6P9H4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.95■□□□□ 0.79
CNKSR3Q6P9H4 AC243591.1-201ENST00000452967 1364 ntBASIC19.95■□□□□ 0.79
CNKSR3Q6P9H4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNKSR3Q6P9H4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CNKSR3Q6P9H4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CNKSR3Q6P9H4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNKSR3Q6P9H4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNKSR3Q6P9H4 AL357033.4-201ENST00000617703 1807 ntBASIC19.95■□□□□ 0.78
CNKSR3Q6P9H4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.95■□□□□ 0.78
CNKSR3Q6P9H4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNKSR3Q6P9H4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNKSR3Q6P9H4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.95■□□□□ 0.78
CNKSR3Q6P9H4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms