Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP3S2P59780 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP3S2P59780 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
AP3S2P59780 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP3S2P59780 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP3S2P59780 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP3S2P59780 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP3S2P59780 AL645608.8-201ENST00000606034 2086 ntBASIC15.99■□□□□ 0.15
AP3S2P59780 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.99■□□□□ 0.15
AP3S2P59780 AC093677.2-201ENST00000600169 1863 ntBASIC15.99■□□□□ 0.15
AP3S2P59780 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
AP3S2P59780 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.99■□□□□ 0.15
AP3S2P59780 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP3S2P59780 HEIH-201ENST00000623091 1652 ntBASIC15.99■□□□□ 0.15
AP3S2P59780 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
AP3S2P59780 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
AP3S2P59780 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.99■□□□□ 0.15
AP3S2P59780 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
AP3S2P59780 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP3S2P59780 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.99■□□□□ 0.15
AP3S2P59780 AK1-201ENST00000223836 736 ntTSL 3 BASIC15.99■□□□□ 0.15
AP3S2P59780 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
AP3S2P59780 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
AP3S2P59780 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
AP3S2P59780 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC15.99■□□□□ 0.15
AP3S2P59780 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
AP3S2P59780 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
AP3S2P59780 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
AP3S2P59780 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP3S2P59780 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.99■□□□□ 0.15
AP3S2P59780 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP3S2P59780 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.99■□□□□ 0.15
AP3S2P59780 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP3S2P59780 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
AP3S2P59780 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP3S2P59780 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP3S2P59780 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
AP3S2P59780 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.99■□□□□ 0.15
AP3S2P59780 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
AP3S2P59780 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
AP3S2P59780 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S2P59780 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S2P59780 AC084018.2-201ENST00000613093 2607 ntBASIC15.98■□□□□ 0.15
AP3S2P59780 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S2P59780 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.98■□□□□ 0.15
AP3S2P59780 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S2P59780 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
AP3S2P59780 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S2P59780 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S2P59780 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S2P59780 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S2P59780 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S2P59780 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S2P59780 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S2P59780 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
AP3S2P59780 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S2P59780 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.98■□□□□ 0.15
AP3S2P59780 YBX1P10-201ENST00000444752 975 ntBASIC15.98■□□□□ 0.15
AP3S2P59780 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S2P59780 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S2P59780 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.98■□□□□ 0.15
AP3S2P59780 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.98■□□□□ 0.15
AP3S2P59780 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S2P59780 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S2P59780 AL031432.3-201ENST00000607698 485 ntBASIC15.98■□□□□ 0.15
AP3S2P59780 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
AP3S2P59780 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
AP3S2P59780 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
AP3S2P59780 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.98■□□□□ 0.15
AP3S2P59780 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S2P59780 FLJ13224-201ENST00000313737 1514 ntBASIC15.98■□□□□ 0.15
AP3S2P59780 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S2P59780 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15.98■□□□□ 0.15
AP3S2P59780 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
AP3S2P59780 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S2P59780 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP3S2P59780 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
AP3S2P59780 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.98■□□□□ 0.15
AP3S2P59780 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
AP3S2P59780 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S2P59780 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.97■□□□□ 0.15
AP3S2P59780 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S2P59780 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
AP3S2P59780 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S2P59780 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S2P59780 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
AP3S2P59780 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S2P59780 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
AP3S2P59780 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
AP3S2P59780 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
AP3S2P59780 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.97■□□□□ 0.15
AP3S2P59780 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S2P59780 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
AP3S2P59780 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC15.97■□□□□ 0.15
AP3S2P59780 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC15.97■□□□□ 0.15
AP3S2P59780 UQCRFS1P1-201ENST00000435169 820 ntBASIC15.97■□□□□ 0.15
AP3S2P59780 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.97■□□□□ 0.15
AP3S2P59780 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
AP3S2P59780 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC15.97■□□□□ 0.15
AP3S2P59780 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms