Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC23.35■■□□□ 1.33
RFC4P35249 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RFC4P35249 RPL18-209ENST00000550645 463 ntTSL 5 BASIC23.35■■□□□ 1.33
RFC4P35249 RPL18-214ENST00000552588 559 ntTSL 3 BASIC23.35■■□□□ 1.33
RFC4P35249 AC139887.3-201ENST00000568585 713 ntBASIC23.35■■□□□ 1.33
RFC4P35249 AL049840.3-201ENST00000602669 611 ntBASIC23.35■■□□□ 1.33
RFC4P35249 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC23.35■■□□□ 1.33
RFC4P35249 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
RFC4P35249 IRX1P1-201ENST00000438849 1838 ntBASIC23.35■■□□□ 1.33
RFC4P35249 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC23.35■■□□□ 1.33
RFC4P35249 CLDN5-201ENST00000403084 2357 ntBASIC23.35■■□□□ 1.33
RFC4P35249 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RFC4P35249 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC23.35■■□□□ 1.33
RFC4P35249 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RFC4P35249 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
RFC4P35249 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RFC4P35249 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RFC4P35249 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RFC4P35249 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.34■■□□□ 1.33
RFC4P35249 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC23.34■■□□□ 1.33
RFC4P35249 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RFC4P35249 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RFC4P35249 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
RFC4P35249 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RFC4P35249 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC23.34■■□□□ 1.33
RFC4P35249 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC23.34■■□□□ 1.33
RFC4P35249 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC23.34■■□□□ 1.33
RFC4P35249 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RFC4P35249 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC23.34■■□□□ 1.33
RFC4P35249 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC23.34■■□□□ 1.33
RFC4P35249 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC23.34■■□□□ 1.33
RFC4P35249 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
RFC4P35249 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
RFC4P35249 LINC01006-201ENST00000333319 2292 ntBASIC23.34■■□□□ 1.33
RFC4P35249 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.34■■□□□ 1.33
RFC4P35249 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RFC4P35249 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RFC4P35249 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC23.33■■□□□ 1.33
RFC4P35249 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RFC4P35249 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC23.33■■□□□ 1.33
RFC4P35249 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RFC4P35249 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.33■■□□□ 1.33
RFC4P35249 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RFC4P35249 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RFC4P35249 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RFC4P35249 BX842568.4-201ENST00000421222 227 ntBASIC23.33■■□□□ 1.33
RFC4P35249 COX10-202ENST00000429152 875 ntTSL 2 BASIC23.33■■□□□ 1.33
RFC4P35249 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC23.33■■□□□ 1.33
RFC4P35249 LITAF-211ENST00000572255 516 ntTSL 4 BASIC23.33■■□□□ 1.33
RFC4P35249 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
RFC4P35249 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC23.33■■□□□ 1.33
RFC4P35249 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RFC4P35249 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RFC4P35249 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RFC4P35249 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
RFC4P35249 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.33■■□□□ 1.32
RFC4P35249 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
RFC4P35249 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC23.33■■□□□ 1.32
RFC4P35249 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC23.33■■□□□ 1.32
RFC4P35249 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RFC4P35249 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RFC4P35249 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
RFC4P35249 ZNF259P1-201ENST00000407656 1365 ntBASIC23.32■■□□□ 1.32
RFC4P35249 HIST2H3DP1-201ENST00000401004 416 ntBASIC23.32■■□□□ 1.32
RFC4P35249 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
RFC4P35249 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
RFC4P35249 AC073648.2-201ENST00000510116 352 ntBASIC23.32■■□□□ 1.32
RFC4P35249 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC23.32■■□□□ 1.32
RFC4P35249 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
RFC4P35249 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC23.32■■□□□ 1.32
RFC4P35249 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC23.32■■□□□ 1.32
RFC4P35249 PIN1-206ENST00000587625 878 ntTSL 2 BASIC23.32■■□□□ 1.32
RFC4P35249 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC23.32■■□□□ 1.32
RFC4P35249 PRKN-208ENST00000610470 531 ntTSL 2 BASIC23.32■■□□□ 1.32
RFC4P35249 PRKN-209ENST00000612485 225 ntTSL 5 BASIC23.32■■□□□ 1.32
RFC4P35249 MIR7706-201ENST00000613747 67 ntBASIC23.32■■□□□ 1.32
RFC4P35249 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RFC4P35249 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC23.32■■□□□ 1.32
RFC4P35249 AC068587.9-201ENST00000641814 219 ntBASIC23.32■■□□□ 1.32
RFC4P35249 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RFC4P35249 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RFC4P35249 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RFC4P35249 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
RFC4P35249 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RFC4P35249 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.31■■□□□ 1.32
RFC4P35249 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RFC4P35249 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC23.31■■□□□ 1.32
RFC4P35249 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RFC4P35249 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RFC4P35249 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RFC4P35249 FAM220CP-201ENST00000395253 831 ntBASIC23.31■■□□□ 1.32
RFC4P35249 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC23.31■■□□□ 1.32
RFC4P35249 AL355877.3-201ENST00000622820 899 ntBASIC23.31■■□□□ 1.32
RFC4P35249 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RFC4P35249 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RFC4P35249 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RFC4P35249 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RFC4P35249 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RFC4P35249 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RFC4P35249 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms