Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
CTGFP29279 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
CTGFP29279 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.96■□□□□ 0.95
CTGFP29279 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.96■□□□□ 0.95
CTGFP29279 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CTGFP29279 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CTGFP29279 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.95■□□□□ 0.94
CTGFP29279 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTGFP29279 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CTGFP29279 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTGFP29279 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.95■□□□□ 0.94
CTGFP29279 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CTGFP29279 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CTGFP29279 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTGFP29279 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTGFP29279 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTGFP29279 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CTGFP29279 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.95■□□□□ 0.94
CTGFP29279 MED15P5-201ENST00000423150 992 ntBASIC20.95■□□□□ 0.94
CTGFP29279 RPS8P6-201ENST00000426177 609 ntBASIC20.95■□□□□ 0.94
CTGFP29279 AC112482.1-201ENST00000492080 688 ntBASIC20.95■□□□□ 0.94
CTGFP29279 SART3-203ENST00000546611 1184 ntBASIC20.95■□□□□ 0.94
CTGFP29279 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.95■□□□□ 0.94
CTGFP29279 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.95■□□□□ 0.94
CTGFP29279 FAM197Y3-203ENST00000618346 717 ntBASIC20.95■□□□□ 0.94
CTGFP29279 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.95■□□□□ 0.94
CTGFP29279 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.95■□□□□ 0.94
CTGFP29279 AC068587.9-201ENST00000641814 219 ntBASIC20.95■□□□□ 0.94
CTGFP29279 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.95■□□□□ 0.94
CTGFP29279 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CTGFP29279 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTGFP29279 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTGFP29279 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CTGFP29279 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.95■□□□□ 0.94
CTGFP29279 IRX1P1-201ENST00000438849 1838 ntBASIC20.94■□□□□ 0.94
CTGFP29279 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTGFP29279 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
CTGFP29279 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTGFP29279 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTGFP29279 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.94■□□□□ 0.94
CTGFP29279 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTGFP29279 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CTGFP29279 RPS2P1-201ENST00000434010 821 ntBASIC20.94■□□□□ 0.94
CTGFP29279 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTGFP29279 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTGFP29279 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.94■□□□□ 0.94
CTGFP29279 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.94■□□□□ 0.94
CTGFP29279 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.94■□□□□ 0.94
CTGFP29279 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.94■□□□□ 0.94
CTGFP29279 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.94■□□□□ 0.94
CTGFP29279 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.94■□□□□ 0.94
CTGFP29279 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTGFP29279 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CTGFP29279 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.94■□□□□ 0.94
CTGFP29279 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTGFP29279 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTGFP29279 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTGFP29279 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.94■□□□□ 0.94
CTGFP29279 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTGFP29279 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CTGFP29279 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CTGFP29279 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.93■□□□□ 0.94
CTGFP29279 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.93■□□□□ 0.94
CTGFP29279 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CTGFP29279 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTGFP29279 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTGFP29279 YBX2P1-201ENST00000394192 760 ntBASIC20.93■□□□□ 0.94
CTGFP29279 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTGFP29279 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.93■□□□□ 0.94
CTGFP29279 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.93■□□□□ 0.94
CTGFP29279 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTGFP29279 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.93■□□□□ 0.94
CTGFP29279 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTGFP29279 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.93■□□□□ 0.94
CTGFP29279 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.93■□□□□ 0.94
CTGFP29279 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTGFP29279 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.93■□□□□ 0.94
CTGFP29279 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
CTGFP29279 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTGFP29279 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CTGFP29279 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
CTGFP29279 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTGFP29279 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CTGFP29279 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTGFP29279 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTGFP29279 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTGFP29279 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CTGFP29279 Z98044.1-201ENST00000632503 1764 ntBASIC20.92■□□□□ 0.94
CTGFP29279 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.92■□□□□ 0.94
CTGFP29279 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTGFP29279 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTGFP29279 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTGFP29279 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.92■□□□□ 0.94
CTGFP29279 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
CTGFP29279 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CTGFP29279 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.92■□□□□ 0.94
CTGFP29279 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
CTGFP29279 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
CTGFP29279 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.92■□□□□ 0.94
CTGFP29279 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms