Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.92■■□□□ 1.1
HLA-DOAP06340 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HLA-DOAP06340 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
HLA-DOAP06340 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HLA-DOAP06340 KRT8P50-201ENST00000562022 1438 ntBASIC21.92■■□□□ 1.1
HLA-DOAP06340 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
HLA-DOAP06340 KRT18P1-202ENST00000452408 1331 ntBASIC21.92■■□□□ 1.1
HLA-DOAP06340 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HLA-DOAP06340 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HLA-DOAP06340 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HLA-DOAP06340 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HLA-DOAP06340 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.92■■□□□ 1.1
HLA-DOAP06340 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.92■■□□□ 1.1
HLA-DOAP06340 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.92■■□□□ 1.1
HLA-DOAP06340 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
HLA-DOAP06340 PRELID1P1-202ENST00000567272 903 ntBASIC21.92■■□□□ 1.1
HLA-DOAP06340 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.92■■□□□ 1.1
HLA-DOAP06340 AC083906.6-201ENST00000641366 219 ntBASIC21.92■■□□□ 1.1
HLA-DOAP06340 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
HLA-DOAP06340 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
HLA-DOAP06340 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HLA-DOAP06340 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.91■■□□□ 1.1
HLA-DOAP06340 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HLA-DOAP06340 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.91■■□□□ 1.1
HLA-DOAP06340 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HLA-DOAP06340 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.91■■□□□ 1.1
HLA-DOAP06340 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.91■■□□□ 1.1
HLA-DOAP06340 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HLA-DOAP06340 AP000593.1-201ENST00000393668 712 ntBASIC21.91■■□□□ 1.1
HLA-DOAP06340 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.91■■□□□ 1.1
HLA-DOAP06340 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.91■■□□□ 1.1
HLA-DOAP06340 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.91■■□□□ 1.1
HLA-DOAP06340 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.91■■□□□ 1.1
HLA-DOAP06340 AC005332.3-201ENST00000589904 676 ntBASIC21.91■■□□□ 1.1
HLA-DOAP06340 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.91■■□□□ 1.1
HLA-DOAP06340 AL121894.2-201ENST00000602977 491 ntBASIC21.91■■□□□ 1.1
HLA-DOAP06340 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HLA-DOAP06340 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HLA-DOAP06340 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.91■■□□□ 1.1
HLA-DOAP06340 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
HLA-DOAP06340 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HLA-DOAP06340 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.91■■□□□ 1.1
HLA-DOAP06340 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
HLA-DOAP06340 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
HLA-DOAP06340 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
HLA-DOAP06340 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.91■■□□□ 1.1
HLA-DOAP06340 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.9■■□□□ 1.1
HLA-DOAP06340 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DOAP06340 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.9■■□□□ 1.1
HLA-DOAP06340 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.9■■□□□ 1.1
HLA-DOAP06340 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DOAP06340 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DOAP06340 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DOAP06340 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DOAP06340 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DOAP06340 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DOAP06340 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DOAP06340 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.9■■□□□ 1.1
HLA-DOAP06340 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.9■■□□□ 1.1
HLA-DOAP06340 KRT18P41-201ENST00000518924 1277 ntBASIC21.9■■□□□ 1.1
HLA-DOAP06340 AL691432.3-201ENST00000621860 400 ntBASIC21.9■■□□□ 1.1
HLA-DOAP06340 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.9■■□□□ 1.1
HLA-DOAP06340 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DOAP06340 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DOAP06340 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DOAP06340 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
HLA-DOAP06340 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
HLA-DOAP06340 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.89■■□□□ 1.1
HLA-DOAP06340 AC005332.7-201ENST00000614046 2005 ntBASIC21.89■■□□□ 1.1
HLA-DOAP06340 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.89■■□□□ 1.1
HLA-DOAP06340 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
HLA-DOAP06340 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
HLA-DOAP06340 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
HLA-DOAP06340 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HLA-DOAP06340 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HLA-DOAP06340 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HLA-DOAP06340 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HLA-DOAP06340 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.89■■□□□ 1.09
HLA-DOAP06340 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HLA-DOAP06340 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.89■■□□□ 1.09
HLA-DOAP06340 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
HLA-DOAP06340 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.89■■□□□ 1.09
HLA-DOAP06340 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.89■■□□□ 1.09
HLA-DOAP06340 AC024563.2-201ENST00000603282 481 ntBASIC21.89■■□□□ 1.09
HLA-DOAP06340 AL390719.2-201ENST00000606993 987 ntBASIC21.89■■□□□ 1.09
HLA-DOAP06340 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HLA-DOAP06340 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.89■■□□□ 1.09
HLA-DOAP06340 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
HLA-DOAP06340 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HLA-DOAP06340 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
HLA-DOAP06340 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HLA-DOAP06340 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HLA-DOAP06340 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HLA-DOAP06340 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HLA-DOAP06340 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HLA-DOAP06340 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HLA-DOAP06340 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.89■■□□□ 1.09
HLA-DOAP06340 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
HLA-DOAP06340 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HLA-DOAP06340 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms