Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC22.2■■□□□ 1.14
FOXN1O15353 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC22.2■■□□□ 1.14
FOXN1O15353 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC22.2■■□□□ 1.14
FOXN1O15353 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC22.2■■□□□ 1.14
FOXN1O15353 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC22.2■■□□□ 1.14
FOXN1O15353 AC148477.8-201ENST00000624298 468 ntBASIC22.2■■□□□ 1.14
FOXN1O15353 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC22.2■■□□□ 1.14
FOXN1O15353 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
FOXN1O15353 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
FOXN1O15353 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXN1O15353 TP73-202ENST00000354437 2140 ntTSL 5 BASIC22.19■■□□□ 1.14
FOXN1O15353 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC22.19■■□□□ 1.14
FOXN1O15353 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXN1O15353 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC22.19■■□□□ 1.14
FOXN1O15353 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXN1O15353 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXN1O15353 MED22-202ENST00000371999 987 ntTSL 3 BASIC22.19■■□□□ 1.14
FOXN1O15353 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXN1O15353 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
FOXN1O15353 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
FOXN1O15353 SART3-203ENST00000546611 1184 ntBASIC22.19■■□□□ 1.14
FOXN1O15353 AC009065.1-201ENST00000564055 1225 ntBASIC22.19■■□□□ 1.14
FOXN1O15353 SPEG-225ENST00000617028 815 ntTSL 5 BASIC22.19■■□□□ 1.14
FOXN1O15353 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
FOXN1O15353 AC112497.1-201ENST00000624824 639 ntBASIC22.19■■□□□ 1.14
FOXN1O15353 LINC00167-201ENST00000530583 1419 ntBASIC22.19■■□□□ 1.14
FOXN1O15353 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXN1O15353 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXN1O15353 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC22.19■■□□□ 1.14
FOXN1O15353 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
FOXN1O15353 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXN1O15353 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXN1O15353 RNF165-205ENST00000588679 2904 ntBASIC22.19■■□□□ 1.14
FOXN1O15353 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXN1O15353 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
FOXN1O15353 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC22.18■■□□□ 1.14
FOXN1O15353 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
FOXN1O15353 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
FOXN1O15353 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
FOXN1O15353 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
FOXN1O15353 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
FOXN1O15353 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC22.18■■□□□ 1.14
FOXN1O15353 PHGDH-210ENST00000641115 1638 ntBASIC22.18■■□□□ 1.14
FOXN1O15353 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
FOXN1O15353 ZNF259P1-201ENST00000407656 1365 ntBASIC22.18■■□□□ 1.14
FOXN1O15353 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
FOXN1O15353 RPSAP43-201ENST00000402237 625 ntBASIC22.18■■□□□ 1.14
FOXN1O15353 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC22.18■■□□□ 1.14
FOXN1O15353 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC22.18■■□□□ 1.14
FOXN1O15353 HLA-J-202ENST00000469281 1241 ntBASIC22.18■■□□□ 1.14
FOXN1O15353 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC22.18■■□□□ 1.14
FOXN1O15353 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
FOXN1O15353 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
FOXN1O15353 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
FOXN1O15353 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC22.18■■□□□ 1.14
FOXN1O15353 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC22.18■■□□□ 1.14
FOXN1O15353 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC22.18■■□□□ 1.14
FOXN1O15353 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
FOXN1O15353 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC22.18■■□□□ 1.14
FOXN1O15353 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
FOXN1O15353 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
FOXN1O15353 Z82202.1-201ENST00000623446 1880 ntBASIC22.17■■□□□ 1.14
FOXN1O15353 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
FOXN1O15353 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
FOXN1O15353 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
FOXN1O15353 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
FOXN1O15353 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC22.17■■□□□ 1.14
FOXN1O15353 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
FOXN1O15353 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
FOXN1O15353 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
FOXN1O15353 KRT18P67-201ENST00000432816 1264 ntBASIC22.17■■□□□ 1.14
FOXN1O15353 AC093909.1-201ENST00000504731 1122 ntBASIC22.17■■□□□ 1.14
FOXN1O15353 TK1-205ENST00000590862 642 ntTSL 3 BASIC22.17■■□□□ 1.14
FOXN1O15353 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
FOXN1O15353 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC22.17■■□□□ 1.14
FOXN1O15353 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC22.17■■□□□ 1.14
FOXN1O15353 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
FOXN1O15353 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
FOXN1O15353 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
FOXN1O15353 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC22.17■■□□□ 1.14
FOXN1O15353 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
FOXN1O15353 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
FOXN1O15353 AP001271.2-201ENST00000624018 1556 ntBASIC22.16■■□□□ 1.14
FOXN1O15353 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
FOXN1O15353 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
FOXN1O15353 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
FOXN1O15353 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
FOXN1O15353 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC22.16■■□□□ 1.14
FOXN1O15353 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
FOXN1O15353 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC22.16■■□□□ 1.14
FOXN1O15353 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC22.16■■□□□ 1.14
FOXN1O15353 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
FOXN1O15353 WBP2-203ENST00000433525 928 ntTSL 2 BASIC22.16■■□□□ 1.14
FOXN1O15353 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC22.16■■□□□ 1.14
FOXN1O15353 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC22.16■■□□□ 1.14
FOXN1O15353 MIR4674-201ENST00000582457 87 ntBASIC22.16■■□□□ 1.14
FOXN1O15353 AC083906.6-201ENST00000641366 219 ntBASIC22.16■■□□□ 1.14
FOXN1O15353 AC079781.4-201ENST00000641908 219 ntBASIC22.16■■□□□ 1.14
FOXN1O15353 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.16■■□□□ 1.14
FOXN1O15353 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms