Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNB4O00305 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNB4O00305 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNB4O00305 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNB4O00305 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNB4O00305 AC006333.2-201ENST00000607957 2099 ntBASIC18.38■□□□□ 0.53
CACNB4O00305 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CACNB4O00305 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB4O00305 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB4O00305 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB4O00305 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CACNB4O00305 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB4O00305 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB4O00305 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.38■□□□□ 0.53
CACNB4O00305 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB4O00305 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB4O00305 AC092597.1-201ENST00000487352 616 ntBASIC18.38■□□□□ 0.53
CACNB4O00305 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.38■□□□□ 0.53
CACNB4O00305 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.38■□□□□ 0.53
CACNB4O00305 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.38■□□□□ 0.53
CACNB4O00305 AC010240.3-201ENST00000607688 395 ntBASIC18.38■□□□□ 0.53
CACNB4O00305 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB4O00305 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.38■□□□□ 0.53
CACNB4O00305 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB4O00305 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB4O00305 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.38■□□□□ 0.53
CACNB4O00305 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB4O00305 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB4O00305 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CACNB4O00305 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CACNB4O00305 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.38■□□□□ 0.53
CACNB4O00305 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB4O00305 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.38■□□□□ 0.53
CACNB4O00305 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB4O00305 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB4O00305 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.38■□□□□ 0.53
CACNB4O00305 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB4O00305 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB4O00305 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB4O00305 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB4O00305 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB4O00305 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
CACNB4O00305 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB4O00305 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CACNB4O00305 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB4O00305 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.37■□□□□ 0.53
CACNB4O00305 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CACNB4O00305 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB4O00305 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.37■□□□□ 0.53
CACNB4O00305 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.37■□□□□ 0.53
CACNB4O00305 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.37■□□□□ 0.53
CACNB4O00305 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.37■□□□□ 0.53
CACNB4O00305 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.37■□□□□ 0.53
CACNB4O00305 AC116407.4-201ENST00000623319 1061 ntBASIC18.37■□□□□ 0.53
CACNB4O00305 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.37■□□□□ 0.53
CACNB4O00305 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.37■□□□□ 0.53
CACNB4O00305 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CACNB4O00305 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB4O00305 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CACNB4O00305 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB4O00305 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.37■□□□□ 0.53
CACNB4O00305 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CACNB4O00305 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB4O00305 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB4O00305 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.37■□□□□ 0.53
CACNB4O00305 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CACNB4O00305 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.37■□□□□ 0.53
CACNB4O00305 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.37■□□□□ 0.53
CACNB4O00305 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB4O00305 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB4O00305 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CACNB4O00305 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CACNB4O00305 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CACNB4O00305 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CACNB4O00305 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CACNB4O00305 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CACNB4O00305 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CACNB4O00305 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CACNB4O00305 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CACNB4O00305 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.36■□□□□ 0.53
CACNB4O00305 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.36■□□□□ 0.53
CACNB4O00305 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.36■□□□□ 0.53
CACNB4O00305 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CACNB4O00305 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CACNB4O00305 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.36■□□□□ 0.53
CACNB4O00305 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.36■□□□□ 0.53
CACNB4O00305 AC083906.6-201ENST00000641366 219 ntBASIC18.36■□□□□ 0.53
CACNB4O00305 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.36■□□□□ 0.53
CACNB4O00305 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CACNB4O00305 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CACNB4O00305 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.35■□□□□ 0.53
CACNB4O00305 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.35■□□□□ 0.53
CACNB4O00305 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CACNB4O00305 Z98044.1-201ENST00000632503 1764 ntBASIC18.35■□□□□ 0.53
CACNB4O00305 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CACNB4O00305 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CACNB4O00305 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CACNB4O00305 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CACNB4O00305 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.35■□□□□ 0.53
CACNB4O00305 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms