Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-2A0A0B4J237 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-2A0A0B4J237 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-2A0A0B4J237 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-2A0A0B4J237 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-2A0A0B4J237 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV8-2A0A0B4J237 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
TRAV8-2A0A0B4J237 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 KRT16P1-201ENST00000399124 1418 ntBASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 AC004951.3-201ENST00000418645 1148 ntBASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 AL499627.1-201ENST00000569373 2188 ntBASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
TRAV8-2A0A0B4J237 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 AL353807.1-201ENST00000427475 662 ntBASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 AC011298.2-201ENST00000617989 482 ntBASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 CR392000.1-201ENST00000624770 1228 ntBASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-2A0A0B4J237 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms