Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21■□□□□ 0.95
PTCH2Q9Y6C5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21■□□□□ 0.95
PTCH2Q9Y6C5 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTCH2Q9Y6C5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21■□□□□ 0.95
PTCH2Q9Y6C5 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PTCH2Q9Y6C5 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21■□□□□ 0.95
PTCH2Q9Y6C5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC21■□□□□ 0.95
PTCH2Q9Y6C5 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PTCH2Q9Y6C5 MTDHP3-201ENST00000594186 672 ntBASIC21■□□□□ 0.95
PTCH2Q9Y6C5 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21■□□□□ 0.95
PTCH2Q9Y6C5 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21■□□□□ 0.95
PTCH2Q9Y6C5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21■□□□□ 0.95
PTCH2Q9Y6C5 AC083906.6-201ENST00000641366 219 ntBASIC21■□□□□ 0.95
PTCH2Q9Y6C5 AC079781.4-201ENST00000641908 219 ntBASIC21■□□□□ 0.95
PTCH2Q9Y6C5 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21■□□□□ 0.95
PTCH2Q9Y6C5 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21■□□□□ 0.95
PTCH2Q9Y6C5 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PTCH2Q9Y6C5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTCH2Q9Y6C5 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTCH2Q9Y6C5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTCH2Q9Y6C5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21■□□□□ 0.95
PTCH2Q9Y6C5 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
PTCH2Q9Y6C5 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
PTCH2Q9Y6C5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PTCH2Q9Y6C5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PTCH2Q9Y6C5 AL512353.2-201ENST00000448759 1962 ntBASIC20.99■□□□□ 0.95
PTCH2Q9Y6C5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
PTCH2Q9Y6C5 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PTCH2Q9Y6C5 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTCH2Q9Y6C5 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PTCH2Q9Y6C5 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PTCH2Q9Y6C5 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.99■□□□□ 0.95
PTCH2Q9Y6C5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTCH2Q9Y6C5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.99■□□□□ 0.95
PTCH2Q9Y6C5 AC034105.1-201ENST00000563488 319 ntBASIC20.99■□□□□ 0.95
PTCH2Q9Y6C5 MIR3687-2-201ENST00000577708 61 ntBASIC20.99■□□□□ 0.95
PTCH2Q9Y6C5 MIR3180-4-201ENST00000582223 153 ntBASIC20.99■□□□□ 0.95
PTCH2Q9Y6C5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.99■□□□□ 0.95
PTCH2Q9Y6C5 MIR3687-1-201ENST00000614492 61 ntBASIC20.99■□□□□ 0.95
PTCH2Q9Y6C5 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PTCH2Q9Y6C5 AC134684.3-201ENST00000641758 218 ntBASIC20.99■□□□□ 0.95
PTCH2Q9Y6C5 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PTCH2Q9Y6C5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.99■□□□□ 0.95
PTCH2Q9Y6C5 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.99■□□□□ 0.95
PTCH2Q9Y6C5 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTCH2Q9Y6C5 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PTCH2Q9Y6C5 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.98■□□□□ 0.95
PTCH2Q9Y6C5 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTCH2Q9Y6C5 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTCH2Q9Y6C5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTCH2Q9Y6C5 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.98■□□□□ 0.95
PTCH2Q9Y6C5 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.98■□□□□ 0.95
PTCH2Q9Y6C5 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.98■□□□□ 0.95
PTCH2Q9Y6C5 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.98■□□□□ 0.95
PTCH2Q9Y6C5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTCH2Q9Y6C5 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.98■□□□□ 0.95
PTCH2Q9Y6C5 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTCH2Q9Y6C5 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTCH2Q9Y6C5 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTCH2Q9Y6C5 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.98■□□□□ 0.95
PTCH2Q9Y6C5 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.98■□□□□ 0.95
PTCH2Q9Y6C5 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.98■□□□□ 0.95
PTCH2Q9Y6C5 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.98■□□□□ 0.95
PTCH2Q9Y6C5 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.98■□□□□ 0.95
PTCH2Q9Y6C5 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PTCH2Q9Y6C5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
PTCH2Q9Y6C5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.98■□□□□ 0.95
PTCH2Q9Y6C5 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.98■□□□□ 0.95
PTCH2Q9Y6C5 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.97■□□□□ 0.95
PTCH2Q9Y6C5 AC092667.1-201ENST00000434301 2586 ntBASIC20.97■□□□□ 0.95
PTCH2Q9Y6C5 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PTCH2Q9Y6C5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.97■□□□□ 0.95
PTCH2Q9Y6C5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCH2Q9Y6C5 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCH2Q9Y6C5 RCN1P2-201ENST00000398357 915 ntBASIC20.97■□□□□ 0.95
PTCH2Q9Y6C5 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTCH2Q9Y6C5 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PTCH2Q9Y6C5 AL591424.1-201ENST00000442569 1213 ntBASIC20.97■□□□□ 0.95
PTCH2Q9Y6C5 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.97■□□□□ 0.95
PTCH2Q9Y6C5 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.97■□□□□ 0.95
PTCH2Q9Y6C5 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.97■□□□□ 0.95
PTCH2Q9Y6C5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCH2Q9Y6C5 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.97■□□□□ 0.95
PTCH2Q9Y6C5 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.97■□□□□ 0.95
PTCH2Q9Y6C5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCH2Q9Y6C5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCH2Q9Y6C5 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTCH2Q9Y6C5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCH2Q9Y6C5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTCH2Q9Y6C5 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTCH2Q9Y6C5 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTCH2Q9Y6C5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTCH2Q9Y6C5 LINC01006-201ENST00000333319 2292 ntBASIC20.96■□□□□ 0.95
PTCH2Q9Y6C5 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTCH2Q9Y6C5 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTCH2Q9Y6C5 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTCH2Q9Y6C5 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTCH2Q9Y6C5 RBM17P3-201ENST00000417687 1192 ntBASIC20.96■□□□□ 0.95
PTCH2Q9Y6C5 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.96■□□□□ 0.95
PTCH2Q9Y6C5 KRT18P3-201ENST00000451602 1288 ntBASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms