Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 SEC63P1-201ENST00000425785 1258 ntBASIC17.6■□□□□ 0.41
LHX6Q9UPM6 FAM8A3P-201ENST00000427218 844 ntBASIC17.6■□□□□ 0.41
LHX6Q9UPM6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 AC139887.3-201ENST00000568585 713 ntBASIC17.6■□□□□ 0.41
LHX6Q9UPM6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 AC024243.1-201ENST00000609234 778 ntBASIC17.6■□□□□ 0.41
LHX6Q9UPM6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 LINC01465-201ENST00000408887 1940 ntBASIC17.59■□□□□ 0.41
LHX6Q9UPM6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 AC233702.3-201ENST00000578656 1387 ntBASIC17.59■□□□□ 0.41
LHX6Q9UPM6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 MIR662-201ENST00000384847 95 ntBASIC17.59■□□□□ 0.41
LHX6Q9UPM6 AL035633.1-201ENST00000406139 838 ntBASIC17.59■□□□□ 0.41
LHX6Q9UPM6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 RNF126P1-202ENST00000569893 925 ntBASIC17.59■□□□□ 0.41
LHX6Q9UPM6 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.59■□□□□ 0.41
LHX6Q9UPM6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
LHX6Q9UPM6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.58■□□□□ 0.41
LHX6Q9UPM6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.58■□□□□ 0.41
LHX6Q9UPM6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LHX6Q9UPM6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LHX6Q9UPM6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
LHX6Q9UPM6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LHX6Q9UPM6 AL020996.1-203ENST00000536896 2307 ntBASIC17.58■□□□□ 0.41
LHX6Q9UPM6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LHX6Q9UPM6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LHX6Q9UPM6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LHX6Q9UPM6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LHX6Q9UPM6 NUS1P2-201ENST00000417358 873 ntBASIC17.58■□□□□ 0.4
LHX6Q9UPM6 KATNBL1P2-201ENST00000433311 835 ntBASIC17.58■□□□□ 0.4
LHX6Q9UPM6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.58■□□□□ 0.4
LHX6Q9UPM6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.58■□□□□ 0.4
LHX6Q9UPM6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LHX6Q9UPM6 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.58■□□□□ 0.4
LHX6Q9UPM6 MIR4674-201ENST00000582457 87 ntBASIC17.58■□□□□ 0.4
LHX6Q9UPM6 AC090616.6-201ENST00000582640 721 ntBASIC17.58■□□□□ 0.4
LHX6Q9UPM6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LHX6Q9UPM6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.58■□□□□ 0.4
LHX6Q9UPM6 IGHV3-41-201ENST00000613121 348 ntBASIC17.58■□□□□ 0.4
LHX6Q9UPM6 AC134684.3-201ENST00000641758 218 ntBASIC17.58■□□□□ 0.4
LHX6Q9UPM6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LHX6Q9UPM6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LHX6Q9UPM6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LHX6Q9UPM6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LHX6Q9UPM6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.58■□□□□ 0.4
LHX6Q9UPM6 AP001271.2-201ENST00000624018 1556 ntBASIC17.57■□□□□ 0.4
LHX6Q9UPM6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LHX6Q9UPM6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
LHX6Q9UPM6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.57■□□□□ 0.4
LHX6Q9UPM6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LHX6Q9UPM6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX6Q9UPM6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LHX6Q9UPM6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX6Q9UPM6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LHX6Q9UPM6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX6Q9UPM6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.57■□□□□ 0.4
LHX6Q9UPM6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LHX6Q9UPM6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LHX6Q9UPM6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.57■□□□□ 0.4
LHX6Q9UPM6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms