Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
MBD1Q9UIS9 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MBD1Q9UIS9 CHCHD2P8-201ENST00000429873 447 ntBASIC18.77■□□□□ 0.6
MBD1Q9UIS9 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD1Q9UIS9 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD1Q9UIS9 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD1Q9UIS9 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MBD1Q9UIS9 KRT17P6-201ENST00000453795 1220 ntBASIC18.77■□□□□ 0.6
MBD1Q9UIS9 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD1Q9UIS9 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD1Q9UIS9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.77■□□□□ 0.6
MBD1Q9UIS9 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
MBD1Q9UIS9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.77■□□□□ 0.6
MBD1Q9UIS9 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.77■□□□□ 0.6
MBD1Q9UIS9 AL136038.4-201ENST00000603606 1261 ntBASIC18.77■□□□□ 0.6
MBD1Q9UIS9 AC112497.1-201ENST00000624824 639 ntBASIC18.77■□□□□ 0.6
MBD1Q9UIS9 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD1Q9UIS9 AL391807.1-203ENST00000604392 2365 ntBASIC18.77■□□□□ 0.6
MBD1Q9UIS9 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
MBD1Q9UIS9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
MBD1Q9UIS9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.77■□□□□ 0.59
MBD1Q9UIS9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
MBD1Q9UIS9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 KRT8P10-201ENST00000450021 1447 ntBASIC18.76■□□□□ 0.59
MBD1Q9UIS9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 MIR662-201ENST00000384847 95 ntBASIC18.76■□□□□ 0.59
MBD1Q9UIS9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 NUS1P1-201ENST00000446295 882 ntBASIC18.76■□□□□ 0.59
MBD1Q9UIS9 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 MIR3917-201ENST00000580971 93 ntBASIC18.76■□□□□ 0.59
MBD1Q9UIS9 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.76■□□□□ 0.59
MBD1Q9UIS9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD1Q9UIS9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MBD1Q9UIS9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD1Q9UIS9 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD1Q9UIS9 KRT8P3-201ENST00000519669 1449 ntBASIC18.75■□□□□ 0.59
MBD1Q9UIS9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD1Q9UIS9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD1Q9UIS9 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.75■□□□□ 0.59
MBD1Q9UIS9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
MBD1Q9UIS9 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD1Q9UIS9 TSPY22P-201ENST00000427496 604 ntBASIC18.75■□□□□ 0.59
MBD1Q9UIS9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.75■□□□□ 0.59
MBD1Q9UIS9 RNF126P1-202ENST00000569893 925 ntBASIC18.75■□□□□ 0.59
MBD1Q9UIS9 IFNL4P1-201ENST00000607083 540 ntBASIC18.75■□□□□ 0.59
MBD1Q9UIS9 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.75■□□□□ 0.59
MBD1Q9UIS9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MBD1Q9UIS9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD1Q9UIS9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.75■□□□□ 0.59
MBD1Q9UIS9 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MBD1Q9UIS9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.75■□□□□ 0.59
MBD1Q9UIS9 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MBD1Q9UIS9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.75■□□□□ 0.59
MBD1Q9UIS9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
MBD1Q9UIS9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD1Q9UIS9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.75■□□□□ 0.59
MBD1Q9UIS9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MBD1Q9UIS9 KRT18P1-202ENST00000452408 1331 ntBASIC18.74■□□□□ 0.59
MBD1Q9UIS9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.74■□□□□ 0.59
MBD1Q9UIS9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.74■□□□□ 0.59
MBD1Q9UIS9 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD1Q9UIS9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD1Q9UIS9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD1Q9UIS9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MBD1Q9UIS9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.74■□□□□ 0.59
MBD1Q9UIS9 FAAHP1-202ENST00000446499 1238 ntBASIC18.74■□□□□ 0.59
MBD1Q9UIS9 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.74■□□□□ 0.59
MBD1Q9UIS9 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.74■□□□□ 0.59
MBD1Q9UIS9 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD1Q9UIS9 AL732292.2-201ENST00000609649 430 ntBASIC18.74■□□□□ 0.59
MBD1Q9UIS9 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
MBD1Q9UIS9 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
MBD1Q9UIS9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.74■□□□□ 0.59
MBD1Q9UIS9 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
MBD1Q9UIS9 AC087289.5-201ENST00000586076 3175 ntBASIC18.74■□□□□ 0.59
MBD1Q9UIS9 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD1Q9UIS9 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MBD1Q9UIS9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms