Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 AC092865.5-201ENST00000545435 363 ntBASIC22.38■■□□□ 1.17
VPS33BQ9H267 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC22.38■■□□□ 1.17
VPS33BQ9H267 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
VPS33BQ9H267 TERC-201ENST00000602385 541 ntBASIC22.38■■□□□ 1.17
VPS33BQ9H267 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
VPS33BQ9H267 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC22.38■■□□□ 1.17
VPS33BQ9H267 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
VPS33BQ9H267 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC22.38■■□□□ 1.17
VPS33BQ9H267 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS33BQ9H267 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS33BQ9H267 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS33BQ9H267 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS33BQ9H267 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS33BQ9H267 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS33BQ9H267 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
VPS33BQ9H267 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS33BQ9H267 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
VPS33BQ9H267 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
VPS33BQ9H267 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
VPS33BQ9H267 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC22.37■■□□□ 1.17
VPS33BQ9H267 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
VPS33BQ9H267 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
VPS33BQ9H267 AL163051.1-201ENST00000569214 1512 ntBASIC22.37■■□□□ 1.17
VPS33BQ9H267 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
VPS33BQ9H267 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
VPS33BQ9H267 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
VPS33BQ9H267 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
VPS33BQ9H267 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
VPS33BQ9H267 FGFR3P6-201ENST00000457012 610 ntBASIC22.37■■□□□ 1.17
VPS33BQ9H267 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
VPS33BQ9H267 AC092183.1-201ENST00000469884 875 ntBASIC22.37■■□□□ 1.17
VPS33BQ9H267 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
VPS33BQ9H267 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC22.37■■□□□ 1.17
VPS33BQ9H267 FAM215A-202ENST00000632077 792 ntBASIC22.37■■□□□ 1.17
VPS33BQ9H267 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
VPS33BQ9H267 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
VPS33BQ9H267 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC22.37■■□□□ 1.17
VPS33BQ9H267 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
VPS33BQ9H267 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
VPS33BQ9H267 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.36■■□□□ 1.17
VPS33BQ9H267 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
VPS33BQ9H267 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
VPS33BQ9H267 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC22.36■■□□□ 1.17
VPS33BQ9H267 FAM220CP-201ENST00000395253 831 ntBASIC22.36■■□□□ 1.17
VPS33BQ9H267 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC22.36■■□□□ 1.17
VPS33BQ9H267 RCN1P2-201ENST00000398357 915 ntBASIC22.36■■□□□ 1.17
VPS33BQ9H267 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC22.36■■□□□ 1.17
VPS33BQ9H267 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
VPS33BQ9H267 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
VPS33BQ9H267 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC22.36■■□□□ 1.17
VPS33BQ9H267 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC22.36■■□□□ 1.17
VPS33BQ9H267 POLD2P1-201ENST00000511220 997 ntBASIC22.36■■□□□ 1.17
VPS33BQ9H267 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC22.36■■□□□ 1.17
VPS33BQ9H267 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC22.36■■□□□ 1.17
VPS33BQ9H267 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC22.36■■□□□ 1.17
VPS33BQ9H267 MIR7706-201ENST00000613747 67 ntBASIC22.36■■□□□ 1.17
VPS33BQ9H267 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
VPS33BQ9H267 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
VPS33BQ9H267 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.36■■□□□ 1.17
VPS33BQ9H267 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC22.36■■□□□ 1.17
VPS33BQ9H267 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
VPS33BQ9H267 PAN3-AS1-201ENST00000563843 1351 ntBASIC22.36■■□□□ 1.17
VPS33BQ9H267 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
VPS33BQ9H267 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC22.36■■□□□ 1.17
VPS33BQ9H267 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC22.35■■□□□ 1.17
VPS33BQ9H267 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
VPS33BQ9H267 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
VPS33BQ9H267 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
VPS33BQ9H267 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
VPS33BQ9H267 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC22.35■■□□□ 1.17
VPS33BQ9H267 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
VPS33BQ9H267 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
VPS33BQ9H267 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
VPS33BQ9H267 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
VPS33BQ9H267 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
VPS33BQ9H267 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
VPS33BQ9H267 BX842568.4-201ENST00000421222 227 ntBASIC22.35■■□□□ 1.17
VPS33BQ9H267 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC22.35■■□□□ 1.17
VPS33BQ9H267 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC22.35■■□□□ 1.17
VPS33BQ9H267 GZMM-202ENST00000592501 941 ntTSL 3 BASIC22.35■■□□□ 1.17
VPS33BQ9H267 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
VPS33BQ9H267 AL357033.4-201ENST00000617703 1807 ntBASIC22.35■■□□□ 1.17
VPS33BQ9H267 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
VPS33BQ9H267 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
VPS33BQ9H267 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
VPS33BQ9H267 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
VPS33BQ9H267 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
VPS33BQ9H267 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
VPS33BQ9H267 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
VPS33BQ9H267 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.35■■□□□ 1.17
VPS33BQ9H267 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
VPS33BQ9H267 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
VPS33BQ9H267 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
VPS33BQ9H267 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
VPS33BQ9H267 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
VPS33BQ9H267 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC22.34■■□□□ 1.17
VPS33BQ9H267 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.34■■□□□ 1.17
VPS33BQ9H267 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
VPS33BQ9H267 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
VPS33BQ9H267 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms