Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC113Q9H0I3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC113Q9H0I3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.64■□□□□ 0.89
CCDC113Q9H0I3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC113Q9H0I3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.64■□□□□ 0.89
CCDC113Q9H0I3 MCCD1P1-208ENST00000445732 328 ntBASIC20.64■□□□□ 0.89
CCDC113Q9H0I3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CCDC113Q9H0I3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
CCDC113Q9H0I3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC113Q9H0I3 AL049597.2-201ENST00000565575 961 ntBASIC20.64■□□□□ 0.89
CCDC113Q9H0I3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CCDC113Q9H0I3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
CCDC113Q9H0I3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC113Q9H0I3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC113Q9H0I3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CCDC113Q9H0I3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC113Q9H0I3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC113Q9H0I3 AL049812.1-201ENST00000432563 2267 ntBASIC20.64■□□□□ 0.89
CCDC113Q9H0I3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 AC036111.1-201ENST00000533973 1582 ntBASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 AK4P3-201ENST00000418260 669 ntBASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 NEK4P2-201ENST00000580004 1012 ntBASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 AL109659.2-201ENST00000606809 1674 ntBASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC113Q9H0I3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC113Q9H0I3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC113Q9H0I3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CCDC113Q9H0I3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
CCDC113Q9H0I3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC113Q9H0I3 BX323043.1-201ENST00000641006 1765 ntBASIC20.62■□□□□ 0.89
CCDC113Q9H0I3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC113Q9H0I3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC113Q9H0I3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC113Q9H0I3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC113Q9H0I3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC113Q9H0I3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC113Q9H0I3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC113Q9H0I3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC113Q9H0I3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC113Q9H0I3 MIR3180-5-201ENST00000583743 153 ntBASIC20.62■□□□□ 0.89
CCDC113Q9H0I3 AC011558.1-201ENST00000623459 338 ntBASIC20.62■□□□□ 0.89
CCDC113Q9H0I3 AL023973.1-201ENST00000624619 620 ntBASIC20.62■□□□□ 0.89
CCDC113Q9H0I3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC113Q9H0I3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC113Q9H0I3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC113Q9H0I3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC113Q9H0I3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC113Q9H0I3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC113Q9H0I3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC113Q9H0I3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC113Q9H0I3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC113Q9H0I3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC113Q9H0I3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC113Q9H0I3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC113Q9H0I3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC113Q9H0I3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC113Q9H0I3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
CCDC113Q9H0I3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC113Q9H0I3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CCDC113Q9H0I3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC113Q9H0I3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC113Q9H0I3 AC063952.2-201ENST00000498792 1227 ntBASIC20.61■□□□□ 0.89
CCDC113Q9H0I3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC113Q9H0I3 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms