Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 OR6D1P-203ENST00000641209 4860 ntBASIC15.13■□□□□ 0.01
NKX6-2Q9C056 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 AC087633.2-202ENST00000565166 1439 ntBASIC15.12■□□□□ 0.01
NKX6-2Q9C056 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 SLC7A5P1-201ENST00000568957 537 ntBASIC15.12■□□□□ 0.01
NKX6-2Q9C056 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX6-2Q9C056 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 RASA4CP-201ENST00000424092 1398 ntBASIC15.11■□□□□ 0.01
NKX6-2Q9C056 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 RBM17P2-201ENST00000616397 1405 ntBASIC15.11■□□□□ 0.01
NKX6-2Q9C056 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 MTURN-203ENST00000409688 843 ntTSL 2 BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.11■□□□□ 0.01
NKX6-2Q9C056 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NKX6-2Q9C056 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
NKX6-2Q9C056 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.1■□□□□ 0.01
NKX6-2Q9C056 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NKX6-2Q9C056 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NKX6-2Q9C056 DOC2GP-204ENST00000639052 2548 ntBASIC15.1■□□□□ 0.01
NKX6-2Q9C056 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NKX6-2Q9C056 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NKX6-2Q9C056 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.1■□□□□ 0.01
NKX6-2Q9C056 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NKX6-2Q9C056 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.1■□□□□ 0.01
NKX6-2Q9C056 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
NKX6-2Q9C056 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
NKX6-2Q9C056 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NKX6-2Q9C056 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NKX6-2Q9C056 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC15.1■□□□□ 0.01
NKX6-2Q9C056 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.1■□□□□ 0.01
NKX6-2Q9C056 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.1■□□□□ 0.01
NKX6-2Q9C056 SLC7A5P2-201ENST00000553010 536 ntBASIC15.1■□□□□ 0.01
NKX6-2Q9C056 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NKX6-2Q9C056 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NKX6-2Q9C056 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms