Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
RTFDC1Q9BY42 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RTFDC1Q9BY42 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22.65■■□□□ 1.22
RTFDC1Q9BY42 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RTFDC1Q9BY42 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
RTFDC1Q9BY42 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
RTFDC1Q9BY42 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC22.64■■□□□ 1.22
RTFDC1Q9BY42 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC22.64■■□□□ 1.22
RTFDC1Q9BY42 UBQLN4P1-201ENST00000461599 1801 ntBASIC22.64■■□□□ 1.22
RTFDC1Q9BY42 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RTFDC1Q9BY42 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
RTFDC1Q9BY42 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.64■■□□□ 1.22
RTFDC1Q9BY42 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC22.64■■□□□ 1.22
RTFDC1Q9BY42 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RTFDC1Q9BY42 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RTFDC1Q9BY42 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
RTFDC1Q9BY42 EMD-201ENST00000369835 966 ntTSL 3 BASIC22.64■■□□□ 1.21
RTFDC1Q9BY42 POM121L3P-201ENST00000419331 1163 ntBASIC22.64■■□□□ 1.21
RTFDC1Q9BY42 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC22.64■■□□□ 1.21
RTFDC1Q9BY42 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC22.64■■□□□ 1.21
RTFDC1Q9BY42 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC22.64■■□□□ 1.21
RTFDC1Q9BY42 AC117500.6-201ENST00000624871 588 ntBASIC22.64■■□□□ 1.21
RTFDC1Q9BY42 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC22.64■■□□□ 1.21
RTFDC1Q9BY42 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.64■■□□□ 1.21
RTFDC1Q9BY42 AL158211.5-201ENST00000623583 2518 ntBASIC22.64■■□□□ 1.21
RTFDC1Q9BY42 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC22.64■■□□□ 1.21
RTFDC1Q9BY42 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RTFDC1Q9BY42 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTFDC1Q9BY42 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
RTFDC1Q9BY42 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
RTFDC1Q9BY42 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
RTFDC1Q9BY42 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RTFDC1Q9BY42 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
RTFDC1Q9BY42 NUS1P2-201ENST00000417358 873 ntBASIC22.63■■□□□ 1.21
RTFDC1Q9BY42 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
RTFDC1Q9BY42 AC068587.9-201ENST00000641814 219 ntBASIC22.63■■□□□ 1.21
RTFDC1Q9BY42 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.63■■□□□ 1.21
RTFDC1Q9BY42 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC22.63■■□□□ 1.21
RTFDC1Q9BY42 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
RTFDC1Q9BY42 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTFDC1Q9BY42 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC22.63■■□□□ 1.21
RTFDC1Q9BY42 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.63■■□□□ 1.21
RTFDC1Q9BY42 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.63■■□□□ 1.21
RTFDC1Q9BY42 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 IRX1P1-201ENST00000438849 1838 ntBASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 MIR574-201ENST00000385209 96 ntBASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 PMS2P1-201ENST00000431037 1228 ntBASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 AP001005.1-201ENST00000571755 1248 ntBASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 AF228730.7-201ENST00000641842 219 ntBASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 POLI-202ENST00000406285 2030 ntTSL 2 BASIC22.62■■□□□ 1.21
RTFDC1Q9BY42 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTFDC1Q9BY42 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTFDC1Q9BY42 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RTFDC1Q9BY42 IL9RP2-201ENST00000423948 1312 ntBASIC22.61■■□□□ 1.21
RTFDC1Q9BY42 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC22.61■■□□□ 1.21
RTFDC1Q9BY42 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
RTFDC1Q9BY42 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.61■■□□□ 1.21
RTFDC1Q9BY42 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RTFDC1Q9BY42 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
RTFDC1Q9BY42 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC22.61■■□□□ 1.21
RTFDC1Q9BY42 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTFDC1Q9BY42 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC22.61■■□□□ 1.21
RTFDC1Q9BY42 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC22.61■■□□□ 1.21
RTFDC1Q9BY42 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTFDC1Q9BY42 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTFDC1Q9BY42 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTFDC1Q9BY42 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTFDC1Q9BY42 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTFDC1Q9BY42 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTFDC1Q9BY42 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTFDC1Q9BY42 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC22.6■■□□□ 1.21
RTFDC1Q9BY42 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTFDC1Q9BY42 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC22.6■■□□□ 1.21
RTFDC1Q9BY42 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTFDC1Q9BY42 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC22.6■■□□□ 1.21
RTFDC1Q9BY42 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC22.6■■□□□ 1.21
RTFDC1Q9BY42 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTFDC1Q9BY42 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms