Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 AC055876.3-201ENST00000431496 288 ntBASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 AL596325.1-201ENST00000563991 1082 ntBASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 AC015911.4-201ENST00000588022 1070 ntBASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 AC138649.4-201ENST00000612222 287 ntBASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL25A1Q9BXS0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 COX5BP8-201ENST00000416911 349 ntBASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 AC025048.6-201ENST00000634326 1161 ntBASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL25A1Q9BXS0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL25A1Q9BXS0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL25A1Q9BXS0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.79■□□□□ 0.6
COL25A1Q9BXS0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL25A1Q9BXS0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL25A1Q9BXS0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.79■□□□□ 0.6
COL25A1Q9BXS0 AC023141.5-201ENST00000458585 616 ntBASIC18.79■□□□□ 0.6
COL25A1Q9BXS0 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
COL25A1Q9BXS0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.79■□□□□ 0.6
COL25A1Q9BXS0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL25A1Q9BXS0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL25A1Q9BXS0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.79■□□□□ 0.6
COL25A1Q9BXS0 AL132655.2-201ENST00000596276 594 ntBASIC18.79■□□□□ 0.6
COL25A1Q9BXS0 AC011467.2-201ENST00000598425 242 ntBASIC18.79■□□□□ 0.6
COL25A1Q9BXS0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
COL25A1Q9BXS0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.79■□□□□ 0.6
COL25A1Q9BXS0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL25A1Q9BXS0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL25A1Q9BXS0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL25A1Q9BXS0 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.79■□□□□ 0.6
COL25A1Q9BXS0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL25A1Q9BXS0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL25A1Q9BXS0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL25A1Q9BXS0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL25A1Q9BXS0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL25A1Q9BXS0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.78■□□□□ 0.6
COL25A1Q9BXS0 AC073621.1-201ENST00000392730 636 ntBASIC18.78■□□□□ 0.6
COL25A1Q9BXS0 FAM58CP-201ENST00000435741 640 ntBASIC18.78■□□□□ 0.6
COL25A1Q9BXS0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.78■□□□□ 0.6
COL25A1Q9BXS0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
COL25A1Q9BXS0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.78■□□□□ 0.6
COL25A1Q9BXS0 AL589182.2-201ENST00000619332 1049 ntBASIC18.78■□□□□ 0.6
COL25A1Q9BXS0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL25A1Q9BXS0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms