Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.45■□□□□ 0.7
CDX2Q99626 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDX2Q99626 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDX2Q99626 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.45■□□□□ 0.7
CDX2Q99626 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.45■□□□□ 0.7
CDX2Q99626 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDX2Q99626 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.45■□□□□ 0.7
CDX2Q99626 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDX2Q99626 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDX2Q99626 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDX2Q99626 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.45■□□□□ 0.7
CDX2Q99626 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.45■□□□□ 0.7
CDX2Q99626 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.45■□□□□ 0.7
CDX2Q99626 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.45■□□□□ 0.7
CDX2Q99626 C20orf181-201ENST00000623918 480 ntBASIC19.45■□□□□ 0.7
CDX2Q99626 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.45■□□□□ 0.7
CDX2Q99626 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CDX2Q99626 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDX2Q99626 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDX2Q99626 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDX2Q99626 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.45■□□□□ 0.7
CDX2Q99626 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
CDX2Q99626 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CDX2Q99626 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.44■□□□□ 0.7
CDX2Q99626 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDX2Q99626 AC006333.2-201ENST00000607957 2099 ntBASIC19.44■□□□□ 0.7
CDX2Q99626 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDX2Q99626 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDX2Q99626 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDX2Q99626 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDX2Q99626 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDX2Q99626 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.44■□□□□ 0.7
CDX2Q99626 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDX2Q99626 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.44■□□□□ 0.7
CDX2Q99626 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDX2Q99626 AL139288.1-201ENST00000623748 933 ntBASIC19.44■□□□□ 0.7
CDX2Q99626 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDX2Q99626 AL512353.2-201ENST00000448759 1962 ntBASIC19.44■□□□□ 0.7
CDX2Q99626 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDX2Q99626 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDX2Q99626 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.43■□□□□ 0.7
CDX2Q99626 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDX2Q99626 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.43■□□□□ 0.7
CDX2Q99626 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
CDX2Q99626 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDX2Q99626 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.43■□□□□ 0.7
CDX2Q99626 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDX2Q99626 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.43■□□□□ 0.7
CDX2Q99626 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.43■□□□□ 0.7
CDX2Q99626 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.43■□□□□ 0.7
CDX2Q99626 MIR4745-201ENST00000577608 62 ntBASIC19.43■□□□□ 0.7
CDX2Q99626 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
CDX2Q99626 AC027612.4-201ENST00000605371 583 ntBASIC19.43■□□□□ 0.7
CDX2Q99626 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.43■□□□□ 0.7
CDX2Q99626 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.43■□□□□ 0.7
CDX2Q99626 AC034236.2-201ENST00000606662 1610 ntBASIC19.43■□□□□ 0.7
CDX2Q99626 AC002310.6-201ENST00000624451 1377 ntBASIC19.43■□□□□ 0.7
CDX2Q99626 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.43■□□□□ 0.7
CDX2Q99626 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDX2Q99626 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDX2Q99626 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDX2Q99626 AF106564.1-201ENST00000607058 2553 ntBASIC19.42■□□□□ 0.7
CDX2Q99626 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.42■□□□□ 0.7
CDX2Q99626 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDX2Q99626 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDX2Q99626 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDX2Q99626 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.42■□□□□ 0.7
CDX2Q99626 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.42■□□□□ 0.7
CDX2Q99626 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.42■□□□□ 0.7
CDX2Q99626 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.42■□□□□ 0.7
CDX2Q99626 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.42■□□□□ 0.7
CDX2Q99626 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.42■□□□□ 0.7
CDX2Q99626 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.42■□□□□ 0.7
CDX2Q99626 NKAPP1-205ENST00000585790 367 ntBASIC19.42■□□□□ 0.7
CDX2Q99626 AC093512.1-201ENST00000617969 520 ntBASIC19.42■□□□□ 0.7
CDX2Q99626 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.42■□□□□ 0.7
CDX2Q99626 AC079834.2-201ENST00000609776 1949 ntBASIC19.42■□□□□ 0.7
CDX2Q99626 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.42■□□□□ 0.7
CDX2Q99626 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.42■□□□□ 0.7
CDX2Q99626 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDX2Q99626 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDX2Q99626 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CDX2Q99626 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDX2Q99626 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDX2Q99626 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDX2Q99626 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDX2Q99626 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDX2Q99626 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDX2Q99626 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDX2Q99626 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDX2Q99626 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.41■□□□□ 0.7
CDX2Q99626 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.41■□□□□ 0.7
CDX2Q99626 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.41■□□□□ 0.7
CDX2Q99626 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.41■□□□□ 0.7
CDX2Q99626 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.41■□□□□ 0.7
CDX2Q99626 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CDX2Q99626 AC097374.2-201ENST00000618617 1306 ntBASIC19.41■□□□□ 0.7
CDX2Q99626 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDX2Q99626 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.41■□□□□ 0.7
CDX2Q99626 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms