Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 RBM17P3-201ENST00000417687 1192 ntBASIC19.37■□□□□ 0.69
CDCA3Q99618 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA3Q99618 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.37■□□□□ 0.69
CDCA3Q99618 SCARNA2-201ENST00000458748 420 ntBASIC19.37■□□□□ 0.69
CDCA3Q99618 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.37■□□□□ 0.69
CDCA3Q99618 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.37■□□□□ 0.69
CDCA3Q99618 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA3Q99618 AL355877.3-201ENST00000622820 899 ntBASIC19.37■□□□□ 0.69
CDCA3Q99618 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.37■□□□□ 0.69
CDCA3Q99618 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA3Q99618 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CDCA3Q99618 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA3Q99618 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA3Q99618 IRX1P1-201ENST00000438849 1838 ntBASIC19.37■□□□□ 0.69
CDCA3Q99618 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA3Q99618 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.36■□□□□ 0.69
CDCA3Q99618 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.36■□□□□ 0.69
CDCA3Q99618 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.36■□□□□ 0.69
CDCA3Q99618 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA3Q99618 AC092667.1-201ENST00000434301 2586 ntBASIC19.36■□□□□ 0.69
CDCA3Q99618 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA3Q99618 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA3Q99618 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CDCA3Q99618 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CDCA3Q99618 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.36■□□□□ 0.69
CDCA3Q99618 BX842568.4-201ENST00000421222 227 ntBASIC19.36■□□□□ 0.69
CDCA3Q99618 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA3Q99618 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.36■□□□□ 0.69
CDCA3Q99618 RPL13AP23-201ENST00000480739 586 ntBASIC19.36■□□□□ 0.69
CDCA3Q99618 POLD2P1-201ENST00000511220 997 ntBASIC19.36■□□□□ 0.69
CDCA3Q99618 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.36■□□□□ 0.69
CDCA3Q99618 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CDCA3Q99618 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CDCA3Q99618 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.36■□□□□ 0.69
CDCA3Q99618 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA3Q99618 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA3Q99618 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA3Q99618 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA3Q99618 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA3Q99618 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.36■□□□□ 0.69
CDCA3Q99618 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA3Q99618 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA3Q99618 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA3Q99618 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.35■□□□□ 0.69
CDCA3Q99618 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.35■□□□□ 0.69
CDCA3Q99618 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
CDCA3Q99618 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA3Q99618 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA3Q99618 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA3Q99618 Z98044.1-201ENST00000632503 1764 ntBASIC19.35■□□□□ 0.69
CDCA3Q99618 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CDCA3Q99618 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA3Q99618 AC113404.2-201ENST00000507884 177 ntBASIC19.35■□□□□ 0.69
CDCA3Q99618 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.35■□□□□ 0.69
CDCA3Q99618 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.35■□□□□ 0.69
CDCA3Q99618 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.35■□□□□ 0.69
CDCA3Q99618 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.35■□□□□ 0.69
CDCA3Q99618 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.35■□□□□ 0.69
CDCA3Q99618 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.35■□□□□ 0.69
CDCA3Q99618 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.35■□□□□ 0.69
CDCA3Q99618 FP475955.4-201ENST00000623131 1990 ntBASIC19.35■□□□□ 0.69
CDCA3Q99618 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CDCA3Q99618 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA3Q99618 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.35■□□□□ 0.69
CDCA3Q99618 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.35■□□□□ 0.69
CDCA3Q99618 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA3Q99618 KRT8P50-201ENST00000562022 1438 ntBASIC19.34■□□□□ 0.69
CDCA3Q99618 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.34■□□□□ 0.69
CDCA3Q99618 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA3Q99618 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA3Q99618 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA3Q99618 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.34■□□□□ 0.69
CDCA3Q99618 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA3Q99618 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CDCA3Q99618 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.34■□□□□ 0.69
CDCA3Q99618 AC092183.1-201ENST00000469884 875 ntBASIC19.34■□□□□ 0.69
CDCA3Q99618 KRT18P41-201ENST00000518924 1277 ntBASIC19.34■□□□□ 0.69
CDCA3Q99618 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.34■□□□□ 0.69
CDCA3Q99618 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.34■□□□□ 0.69
CDCA3Q99618 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA3Q99618 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.34■□□□□ 0.69
CDCA3Q99618 TREX1-205ENST00000625293 1783 ntBASIC19.34■□□□□ 0.69
CDCA3Q99618 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA3Q99618 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA3Q99618 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.34■□□□□ 0.69
CDCA3Q99618 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA3Q99618 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA3Q99618 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.33■□□□□ 0.69
CDCA3Q99618 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDCA3Q99618 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.33■□□□□ 0.68
CDCA3Q99618 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.33■□□□□ 0.68
CDCA3Q99618 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.33■□□□□ 0.68
CDCA3Q99618 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CDCA3Q99618 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.33■□□□□ 0.68
CDCA3Q99618 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDCA3Q99618 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.33■□□□□ 0.68
CDCA3Q99618 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.33■□□□□ 0.68
CDCA3Q99618 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CDCA3Q99618 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.33■□□□□ 0.68
CDCA3Q99618 MIR7706-201ENST00000613747 67 ntBASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms