Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NECTIN4Q96NY8 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NECTIN4Q96NY8 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NECTIN4Q96NY8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NECTIN4Q96NY8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
NECTIN4Q96NY8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NECTIN4Q96NY8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NECTIN4Q96NY8 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NECTIN4Q96NY8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NECTIN4Q96NY8 Z82202.1-201ENST00000623446 1880 ntBASIC19.28■□□□□ 0.68
NECTIN4Q96NY8 KRT8P32-201ENST00000512863 1461 ntBASIC19.28■□□□□ 0.68
NECTIN4Q96NY8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.28■□□□□ 0.68
NECTIN4Q96NY8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.28■□□□□ 0.68
NECTIN4Q96NY8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.27■□□□□ 0.68
NECTIN4Q96NY8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
NECTIN4Q96NY8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
NECTIN4Q96NY8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NECTIN4Q96NY8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NECTIN4Q96NY8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NECTIN4Q96NY8 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.27■□□□□ 0.68
NECTIN4Q96NY8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.27■□□□□ 0.68
NECTIN4Q96NY8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NECTIN4Q96NY8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NECTIN4Q96NY8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NECTIN4Q96NY8 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.27■□□□□ 0.68
NECTIN4Q96NY8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NECTIN4Q96NY8 AC106730.1-201ENST00000566722 1090 ntBASIC19.27■□□□□ 0.68
NECTIN4Q96NY8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.27■□□□□ 0.68
NECTIN4Q96NY8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.27■□□□□ 0.68
NECTIN4Q96NY8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.27■□□□□ 0.68
NECTIN4Q96NY8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.27■□□□□ 0.68
NECTIN4Q96NY8 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NECTIN4Q96NY8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NECTIN4Q96NY8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
NECTIN4Q96NY8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NECTIN4Q96NY8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NECTIN4Q96NY8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NECTIN4Q96NY8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
NECTIN4Q96NY8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NECTIN4Q96NY8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.26■□□□□ 0.67
NECTIN4Q96NY8 AC099778.1-201ENST00000568593 1911 ntBASIC19.26■□□□□ 0.67
NECTIN4Q96NY8 FAM220CP-201ENST00000395253 831 ntBASIC19.26■□□□□ 0.67
NECTIN4Q96NY8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.26■□□□□ 0.67
NECTIN4Q96NY8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NECTIN4Q96NY8 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NECTIN4Q96NY8 MIR5100-201ENST00000579544 119 ntBASIC19.26■□□□□ 0.67
NECTIN4Q96NY8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.26■□□□□ 0.67
NECTIN4Q96NY8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NECTIN4Q96NY8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NECTIN4Q96NY8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.26■□□□□ 0.67
NECTIN4Q96NY8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.26■□□□□ 0.67
NECTIN4Q96NY8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NECTIN4Q96NY8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NECTIN4Q96NY8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 PMS2P7-201ENST00000506558 1336 ntBASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 AC091607.1-201ENST00000490318 1060 ntBASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
NECTIN4Q96NY8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NECTIN4Q96NY8 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NECTIN4Q96NY8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NECTIN4Q96NY8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NECTIN4Q96NY8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NECTIN4Q96NY8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NECTIN4Q96NY8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NECTIN4Q96NY8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NECTIN4Q96NY8 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NECTIN4Q96NY8 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NECTIN4Q96NY8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.24■□□□□ 0.67
NECTIN4Q96NY8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
NECTIN4Q96NY8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.24■□□□□ 0.67
NECTIN4Q96NY8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.24■□□□□ 0.67
NECTIN4Q96NY8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.24■□□□□ 0.67
NECTIN4Q96NY8 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NECTIN4Q96NY8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.24■□□□□ 0.67
NECTIN4Q96NY8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.24■□□□□ 0.67
NECTIN4Q96NY8 BNIP3P18-201ENST00000593976 575 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms