Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 AC006333.2-201ENST00000607957 2099 ntBASIC18.69■□□□□ 0.58
SIPA1Q96FS4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 RNF126P1-202ENST00000569893 925 ntBASIC18.69■□□□□ 0.58
SIPA1Q96FS4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 AL158211.5-201ENST00000623583 2518 ntBASIC18.69■□□□□ 0.58
SIPA1Q96FS4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIPA1Q96FS4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.68■□□□□ 0.58
SIPA1Q96FS4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SIPA1Q96FS4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIPA1Q96FS4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIPA1Q96FS4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIPA1Q96FS4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIPA1Q96FS4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIPA1Q96FS4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SIPA1Q96FS4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIPA1Q96FS4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SIPA1Q96FS4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.68■□□□□ 0.58
SIPA1Q96FS4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.68■□□□□ 0.58
SIPA1Q96FS4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.68■□□□□ 0.58
SIPA1Q96FS4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.68■□□□□ 0.58
SIPA1Q96FS4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.68■□□□□ 0.58
SIPA1Q96FS4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SIPA1Q96FS4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIPA1Q96FS4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIPA1Q96FS4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SIPA1Q96FS4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SIPA1Q96FS4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIPA1Q96FS4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIPA1Q96FS4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIPA1Q96FS4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.67■□□□□ 0.58
SIPA1Q96FS4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIPA1Q96FS4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SIPA1Q96FS4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIPA1Q96FS4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIPA1Q96FS4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIPA1Q96FS4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SIPA1Q96FS4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIPA1Q96FS4 PVRIG2P-201ENST00000435460 978 ntBASIC18.67■□□□□ 0.58
SIPA1Q96FS4 MIR3180-4-201ENST00000582223 153 ntBASIC18.67■□□□□ 0.58
SIPA1Q96FS4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SIPA1Q96FS4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SIPA1Q96FS4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SIPA1Q96FS4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.67■□□□□ 0.58
SIPA1Q96FS4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.67■□□□□ 0.58
SIPA1Q96FS4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIPA1Q96FS4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SIPA1Q96FS4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIPA1Q96FS4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SIPA1Q96FS4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 AP003733.1-201ENST00000491725 852 ntBASIC18.66■□□□□ 0.58
SIPA1Q96FS4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 Z83836.1-201ENST00000624605 1642 ntBASIC18.66■□□□□ 0.58
SIPA1Q96FS4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.66■□□□□ 0.58
SIPA1Q96FS4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIPA1Q96FS4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms