Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCC1Q92922 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCC1Q92922 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCC1Q92922 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC23.8■■□□□ 1.4
SMARCC1Q92922 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SMARCC1Q92922 AC106730.1-201ENST00000566722 1090 ntBASIC23.8■■□□□ 1.4
SMARCC1Q92922 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC23.8■■□□□ 1.4
SMARCC1Q92922 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC23.8■■□□□ 1.4
SMARCC1Q92922 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC23.8■■□□□ 1.4
SMARCC1Q92922 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SMARCC1Q92922 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCC1Q92922 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
SMARCC1Q92922 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCC1Q92922 IRX1P1-201ENST00000438849 1838 ntBASIC23.8■■□□□ 1.4
SMARCC1Q92922 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCC1Q92922 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCC1Q92922 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCC1Q92922 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
SMARCC1Q92922 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCC1Q92922 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC23.79■■□□□ 1.4
SMARCC1Q92922 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCC1Q92922 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCC1Q92922 DDT-203ENST00000403754 569 ntTSL 3 BASIC23.79■■□□□ 1.4
SMARCC1Q92922 DDT-206ENST00000430101 573 ntTSL 2 BASIC23.79■■□□□ 1.4
SMARCC1Q92922 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCC1Q92922 AC148477.8-201ENST00000624298 468 ntBASIC23.79■■□□□ 1.4
SMARCC1Q92922 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCC1Q92922 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC23.79■■□□□ 1.4
SMARCC1Q92922 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.79■■□□□ 1.4
SMARCC1Q92922 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
SMARCC1Q92922 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCC1Q92922 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCC1Q92922 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCC1Q92922 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCC1Q92922 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCC1Q92922 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCC1Q92922 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCC1Q92922 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
SMARCC1Q92922 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCC1Q92922 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCC1Q92922 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCC1Q92922 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCC1Q92922 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC23.78■■□□□ 1.4
SMARCC1Q92922 AC008608.2-201ENST00000606089 416 ntBASIC23.78■■□□□ 1.4
SMARCC1Q92922 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC23.78■■□□□ 1.4
SMARCC1Q92922 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SMARCC1Q92922 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC23.78■■□□□ 1.4
SMARCC1Q92922 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCC1Q92922 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCC1Q92922 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCC1Q92922 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCC1Q92922 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
SMARCC1Q92922 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCC1Q92922 TREX1-205ENST00000625293 1783 ntBASIC23.78■■□□□ 1.4
SMARCC1Q92922 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCC1Q92922 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCC1Q92922 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCC1Q92922 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCC1Q92922 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
SMARCC1Q92922 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCC1Q92922 CCS-201ENST00000310190 942 ntTSL 5 BASIC23.77■■□□□ 1.4
SMARCC1Q92922 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC23.77■■□□□ 1.4
SMARCC1Q92922 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC23.77■■□□□ 1.4
SMARCC1Q92922 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC23.77■■□□□ 1.4
SMARCC1Q92922 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC23.77■■□□□ 1.4
SMARCC1Q92922 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCC1Q92922 AC096582.2-201ENST00000510860 516 ntBASIC23.77■■□□□ 1.4
SMARCC1Q92922 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCC1Q92922 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC23.77■■□□□ 1.4
SMARCC1Q92922 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC23.77■■□□□ 1.4
SMARCC1Q92922 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC23.77■■□□□ 1.4
SMARCC1Q92922 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCC1Q92922 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.77■■□□□ 1.4
SMARCC1Q92922 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
SMARCC1Q92922 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCC1Q92922 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCC1Q92922 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCC1Q92922 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC23.76■■□□□ 1.39
SMARCC1Q92922 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC23.76■■□□□ 1.39
SMARCC1Q92922 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMARCC1Q92922 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.76■■□□□ 1.39
SMARCC1Q92922 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC23.76■■□□□ 1.39
SMARCC1Q92922 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMARCC1Q92922 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC23.76■■□□□ 1.39
SMARCC1Q92922 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC23.76■■□□□ 1.39
SMARCC1Q92922 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
SMARCC1Q92922 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC23.76■■□□□ 1.39
SMARCC1Q92922 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMARCC1Q92922 AC132008.2-207ENST00000454517 770 ntBASIC23.76■■□□□ 1.39
SMARCC1Q92922 AC018712.1-201ENST00000455767 687 ntBASIC23.76■■□□□ 1.39
SMARCC1Q92922 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC23.76■■□□□ 1.39
SMARCC1Q92922 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SMARCC1Q92922 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC23.76■■□□□ 1.39
SMARCC1Q92922 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC23.76■■□□□ 1.39
SMARCC1Q92922 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMARCC1Q92922 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMARCC1Q92922 ANKRD20A8P-203ENST00000641373 517 ntBASIC23.76■■□□□ 1.39
SMARCC1Q92922 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC23.76■■□□□ 1.39
SMARCC1Q92922 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SMARCC1Q92922 AC243591.1-201ENST00000452967 1364 ntBASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms