Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.3■■□□□ 1
U2AF1L4Q8WU68 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
U2AF1L4Q8WU68 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
U2AF1L4Q8WU68 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.29■■□□□ 1
U2AF1L4Q8WU68 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
U2AF1L4Q8WU68 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
U2AF1L4Q8WU68 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
U2AF1L4Q8WU68 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
U2AF1L4Q8WU68 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.29■■□□□ 1
U2AF1L4Q8WU68 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.29■■□□□ 1
U2AF1L4Q8WU68 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.29■■□□□ 1
U2AF1L4Q8WU68 RNF126P1-202ENST00000569893 925 ntBASIC21.29■■□□□ 1
U2AF1L4Q8WU68 AL136038.4-201ENST00000603606 1261 ntBASIC21.29■■□□□ 1
U2AF1L4Q8WU68 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
U2AF1L4Q8WU68 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
U2AF1L4Q8WU68 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.29■■□□□ 1
U2AF1L4Q8WU68 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
U2AF1L4Q8WU68 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
U2AF1L4Q8WU68 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
U2AF1L4Q8WU68 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.28■■□□□ 1
U2AF1L4Q8WU68 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
U2AF1L4Q8WU68 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC21.28■■□□□ 1
U2AF1L4Q8WU68 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.28■■□□□ 1
U2AF1L4Q8WU68 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.28■■□□□ 1
U2AF1L4Q8WU68 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.28■■□□□ 1
U2AF1L4Q8WU68 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC21.28■■□□□ 1
U2AF1L4Q8WU68 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC21.28■■□□□ 1
U2AF1L4Q8WU68 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.28■■□□□ 1
U2AF1L4Q8WU68 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
U2AF1L4Q8WU68 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.28■■□□□ 1
U2AF1L4Q8WU68 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
U2AF1L4Q8WU68 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
U2AF1L4Q8WU68 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.28■■□□□ 1
U2AF1L4Q8WU68 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
U2AF1L4Q8WU68 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
U2AF1L4Q8WU68 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
U2AF1L4Q8WU68 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.28■■□□□ 1
U2AF1L4Q8WU68 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.28■■□□□ 1
U2AF1L4Q8WU68 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
U2AF1L4Q8WU68 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.27■■□□□ 1
U2AF1L4Q8WU68 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
U2AF1L4Q8WU68 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
U2AF1L4Q8WU68 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
U2AF1L4Q8WU68 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.27■■□□□ 1
U2AF1L4Q8WU68 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
U2AF1L4Q8WU68 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
U2AF1L4Q8WU68 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.27■■□□□ 1
U2AF1L4Q8WU68 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.27■■□□□ 1
U2AF1L4Q8WU68 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
U2AF1L4Q8WU68 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.27■■□□□ 1
U2AF1L4Q8WU68 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
U2AF1L4Q8WU68 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
U2AF1L4Q8WU68 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
U2AF1L4Q8WU68 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
U2AF1L4Q8WU68 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.27■■□□□ 1
U2AF1L4Q8WU68 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
U2AF1L4Q8WU68 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
U2AF1L4Q8WU68 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
U2AF1L4Q8WU68 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
U2AF1L4Q8WU68 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.27■■□□□ 1
U2AF1L4Q8WU68 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
U2AF1L4Q8WU68 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 MIR1233-2-201ENST00000408138 82 ntBASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 MIR1233-1-201ENST00000408722 82 ntBASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 AL157888.1-201ENST00000631930 593 ntBASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 IL9RP2-201ENST00000423948 1312 ntBASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.26■□□□□ 0.99
U2AF1L4Q8WU68 TREX1-205ENST00000625293 1783 ntBASIC21.25■□□□□ 0.99
U2AF1L4Q8WU68 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
U2AF1L4Q8WU68 AL391807.1-203ENST00000604392 2365 ntBASIC21.25■□□□□ 0.99
U2AF1L4Q8WU68 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
U2AF1L4Q8WU68 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
U2AF1L4Q8WU68 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
U2AF1L4Q8WU68 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
U2AF1L4Q8WU68 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
U2AF1L4Q8WU68 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
U2AF1L4Q8WU68 SEC1P-202ENST00000473944 940 ntBASIC21.25■□□□□ 0.99
U2AF1L4Q8WU68 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms