Protein–RNA interactions for Protein: Q8N556

AFAP1, Actin filament-associated protein 1, humanhuman

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1Q8N556 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
AFAP1Q8N556 AC005336.2-201ENST00000593183 939 ntBASIC27.86■■■□□ 2.05
AFAP1Q8N556 AC068587.9-201ENST00000641814 219 ntBASIC27.86■■■□□ 2.05
AFAP1Q8N556 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC27.86■■■□□ 2.05
AFAP1Q8N556 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
AFAP1Q8N556 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
AFAP1Q8N556 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
AFAP1Q8N556 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
AFAP1Q8N556 UBQLN4P1-201ENST00000461599 1801 ntBASIC27.85■■■□□ 2.05
AFAP1Q8N556 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC27.85■■■□□ 2.05
AFAP1Q8N556 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC27.85■■■□□ 2.05
AFAP1Q8N556 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC27.85■■■□□ 2.05
AFAP1Q8N556 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC27.85■■■□□ 2.05
AFAP1Q8N556 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC27.85■■■□□ 2.05
AFAP1Q8N556 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC27.85■■■□□ 2.05
AFAP1Q8N556 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC27.85■■■□□ 2.05
AFAP1Q8N556 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
AFAP1Q8N556 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
AFAP1Q8N556 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
AFAP1Q8N556 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC27.85■■■□□ 2.05
AFAP1Q8N556 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
AFAP1Q8N556 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
AFAP1Q8N556 ZNF259P1-201ENST00000407656 1365 ntBASIC27.85■■■□□ 2.05
AFAP1Q8N556 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
AFAP1Q8N556 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
AFAP1Q8N556 KRT8P50-201ENST00000562022 1438 ntBASIC27.84■■■□□ 2.05
AFAP1Q8N556 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
AFAP1Q8N556 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
AFAP1Q8N556 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC27.84■■■□□ 2.05
AFAP1Q8N556 MED16-201ENST00000269814 1199 ntTSL 5 BASIC27.84■■■□□ 2.05
AFAP1Q8N556 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
AFAP1Q8N556 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
AFAP1Q8N556 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC27.84■■■□□ 2.05
AFAP1Q8N556 SCARNA2-201ENST00000458748 420 ntBASIC27.84■■■□□ 2.05
AFAP1Q8N556 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC27.84■■■□□ 2.05
AFAP1Q8N556 PAM16-208ENST00000573553 722 ntTSL 2 BASIC27.84■■■□□ 2.05
AFAP1Q8N556 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
AFAP1Q8N556 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC27.84■■■□□ 2.05
AFAP1Q8N556 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
AFAP1Q8N556 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
AFAP1Q8N556 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
AFAP1Q8N556 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
AFAP1Q8N556 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC27.84■■■□□ 2.05
AFAP1Q8N556 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
AFAP1Q8N556 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
AFAP1Q8N556 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
AFAP1Q8N556 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC27.83■■■□□ 2.05
AFAP1Q8N556 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
AFAP1Q8N556 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.05
AFAP1Q8N556 LINC01006-201ENST00000333319 2292 ntBASIC27.83■■■□□ 2.05
AFAP1Q8N556 HIST2H3DP1-201ENST00000401004 416 ntBASIC27.83■■■□□ 2.05
AFAP1Q8N556 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC27.83■■■□□ 2.05
AFAP1Q8N556 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
AFAP1Q8N556 HMGN1P19-201ENST00000436976 333 ntBASIC27.83■■■□□ 2.05
AFAP1Q8N556 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC27.83■■■□□ 2.05
AFAP1Q8N556 AP001269.4-201ENST00000609611 512 ntBASIC27.83■■■□□ 2.05
AFAP1Q8N556 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
AFAP1Q8N556 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC27.83■■■□□ 2.05
AFAP1Q8N556 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC27.83■■■□□ 2.05
AFAP1Q8N556 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC27.83■■■□□ 2.04
AFAP1Q8N556 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.04
AFAP1Q8N556 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
AFAP1Q8N556 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
AFAP1Q8N556 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
AFAP1Q8N556 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
AFAP1Q8N556 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC27.82■■■□□ 2.04
AFAP1Q8N556 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
AFAP1Q8N556 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
AFAP1Q8N556 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC27.82■■■□□ 2.04
AFAP1Q8N556 IGHV3-22-201ENST00000520721 359 ntBASIC27.82■■■□□ 2.04
AFAP1Q8N556 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC27.82■■■□□ 2.04
AFAP1Q8N556 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
AFAP1Q8N556 MTDHP3-201ENST00000594186 672 ntBASIC27.82■■■□□ 2.04
AFAP1Q8N556 AL691403.2-201ENST00000618460 490 ntBASIC27.82■■■□□ 2.04
AFAP1Q8N556 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
AFAP1Q8N556 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC27.82■■■□□ 2.04
AFAP1Q8N556 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC27.82■■■□□ 2.04
AFAP1Q8N556 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
AFAP1Q8N556 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
AFAP1Q8N556 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC27.82■■■□□ 2.04
AFAP1Q8N556 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
AFAP1Q8N556 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
AFAP1Q8N556 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC27.81■■■□□ 2.04
AFAP1Q8N556 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
AFAP1Q8N556 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
AFAP1Q8N556 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
AFAP1Q8N556 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
AFAP1Q8N556 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
AFAP1Q8N556 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
AFAP1Q8N556 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
AFAP1Q8N556 CSF3-203ENST00000394148 622 ntTSL 3 BASIC27.81■■■□□ 2.04
AFAP1Q8N556 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC27.81■■■□□ 2.04
AFAP1Q8N556 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC27.81■■■□□ 2.04
AFAP1Q8N556 AC145285.3-201ENST00000564603 959 ntBASIC27.81■■■□□ 2.04
AFAP1Q8N556 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC27.81■■■□□ 2.04
AFAP1Q8N556 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC27.81■■■□□ 2.04
AFAP1Q8N556 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC27.81■■■□□ 2.04
AFAP1Q8N556 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC27.81■■■□□ 2.04
AFAP1Q8N556 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC27.81■■■□□ 2.04
AFAP1Q8N556 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms