Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC23.45■■□□□ 1.34
RC3H1Q5TC82 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RC3H1Q5TC82 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RC3H1Q5TC82 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
RC3H1Q5TC82 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RC3H1Q5TC82 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC23.44■■□□□ 1.34
RC3H1Q5TC82 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RC3H1Q5TC82 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC23.44■■□□□ 1.34
RC3H1Q5TC82 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC23.44■■□□□ 1.34
RC3H1Q5TC82 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
RC3H1Q5TC82 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
RC3H1Q5TC82 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RC3H1Q5TC82 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RC3H1Q5TC82 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
RC3H1Q5TC82 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC23.44■■□□□ 1.34
RC3H1Q5TC82 AC113404.2-201ENST00000507884 177 ntBASIC23.44■■□□□ 1.34
RC3H1Q5TC82 AC096582.2-201ENST00000510860 516 ntBASIC23.44■■□□□ 1.34
RC3H1Q5TC82 AC139887.3-201ENST00000568585 713 ntBASIC23.44■■□□□ 1.34
RC3H1Q5TC82 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC23.44■■□□□ 1.34
RC3H1Q5TC82 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RC3H1Q5TC82 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RC3H1Q5TC82 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RC3H1Q5TC82 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC23.44■■□□□ 1.34
RC3H1Q5TC82 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC23.44■■□□□ 1.34
RC3H1Q5TC82 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RC3H1Q5TC82 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RC3H1Q5TC82 AL163051.1-201ENST00000569214 1512 ntBASIC23.43■■□□□ 1.34
RC3H1Q5TC82 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
RC3H1Q5TC82 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RC3H1Q5TC82 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC23.43■■□□□ 1.34
RC3H1Q5TC82 PMS2P7-201ENST00000506558 1336 ntBASIC23.43■■□□□ 1.34
RC3H1Q5TC82 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RC3H1Q5TC82 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RC3H1Q5TC82 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC23.43■■□□□ 1.34
RC3H1Q5TC82 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RC3H1Q5TC82 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RC3H1Q5TC82 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
RC3H1Q5TC82 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC23.43■■□□□ 1.34
RC3H1Q5TC82 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC23.43■■□□□ 1.34
RC3H1Q5TC82 MIR7706-201ENST00000613747 67 ntBASIC23.43■■□□□ 1.34
RC3H1Q5TC82 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
RC3H1Q5TC82 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RC3H1Q5TC82 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC23.43■■□□□ 1.34
RC3H1Q5TC82 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
RC3H1Q5TC82 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
RC3H1Q5TC82 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC23.43■■□□□ 1.34
RC3H1Q5TC82 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
RC3H1Q5TC82 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RC3H1Q5TC82 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC23.43■■□□□ 1.34
RC3H1Q5TC82 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
RC3H1Q5TC82 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RC3H1Q5TC82 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23.42■■□□□ 1.34
RC3H1Q5TC82 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC23.42■■□□□ 1.34
RC3H1Q5TC82 RCN1P2-201ENST00000398357 915 ntBASIC23.42■■□□□ 1.34
RC3H1Q5TC82 COX10-202ENST00000429152 875 ntTSL 2 BASIC23.42■■□□□ 1.34
RC3H1Q5TC82 FGFR3P6-201ENST00000457012 610 ntBASIC23.42■■□□□ 1.34
RC3H1Q5TC82 RPL13AP23-201ENST00000480739 586 ntBASIC23.42■■□□□ 1.34
RC3H1Q5TC82 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC23.42■■□□□ 1.34
RC3H1Q5TC82 POLD2P1-201ENST00000511220 997 ntBASIC23.42■■□□□ 1.34
RC3H1Q5TC82 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC23.42■■□□□ 1.34
RC3H1Q5TC82 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC23.42■■□□□ 1.34
RC3H1Q5TC82 LITAF-211ENST00000572255 516 ntTSL 4 BASIC23.42■■□□□ 1.34
RC3H1Q5TC82 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC23.42■■□□□ 1.34
RC3H1Q5TC82 AL049840.3-201ENST00000602669 611 ntBASIC23.42■■□□□ 1.34
RC3H1Q5TC82 FAM215A-202ENST00000632077 792 ntBASIC23.42■■□□□ 1.34
RC3H1Q5TC82 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RC3H1Q5TC82 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
RC3H1Q5TC82 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RC3H1Q5TC82 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
RC3H1Q5TC82 AC141586.3-201ENST00000562166 1838 ntBASIC23.42■■□□□ 1.34
RC3H1Q5TC82 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC23.42■■□□□ 1.34
RC3H1Q5TC82 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
RC3H1Q5TC82 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RC3H1Q5TC82 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RC3H1Q5TC82 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RC3H1Q5TC82 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
RC3H1Q5TC82 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RC3H1Q5TC82 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RC3H1Q5TC82 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RC3H1Q5TC82 FABP5-202ENST00000396359 986 ntTSL 5 BASIC23.41■■□□□ 1.34
RC3H1Q5TC82 RBM17P3-201ENST00000417687 1192 ntBASIC23.41■■□□□ 1.34
RC3H1Q5TC82 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC23.41■■□□□ 1.34
RC3H1Q5TC82 THAP5-204ENST00000438865 868 ntTSL 2 BASIC23.41■■□□□ 1.34
RC3H1Q5TC82 SCARNA2-201ENST00000458748 420 ntBASIC23.41■■□□□ 1.34
RC3H1Q5TC82 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC23.41■■□□□ 1.34
RC3H1Q5TC82 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC23.41■■□□□ 1.34
RC3H1Q5TC82 PIN1-206ENST00000587625 878 ntTSL 2 BASIC23.41■■□□□ 1.34
RC3H1Q5TC82 PRKN-208ENST00000610470 531 ntTSL 2 BASIC23.41■■□□□ 1.34
RC3H1Q5TC82 PRKN-209ENST00000612485 225 ntTSL 5 BASIC23.41■■□□□ 1.34
RC3H1Q5TC82 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC23.41■■□□□ 1.34
RC3H1Q5TC82 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RC3H1Q5TC82 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RC3H1Q5TC82 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RC3H1Q5TC82 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RC3H1Q5TC82 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RC3H1Q5TC82 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC23.4■■□□□ 1.34
RC3H1Q5TC82 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC23.4■■□□□ 1.34
RC3H1Q5TC82 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RC3H1Q5TC82 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
RC3H1Q5TC82 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC23.4■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms