Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 ATP5G2P1-201ENST00000433580 426 ntBASIC19.3■□□□□ 0.68
HOXC13P31276 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.3■□□□□ 0.68
HOXC13P31276 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.3■□□□□ 0.68
HOXC13P31276 MIR3180-5-201ENST00000583743 153 ntBASIC19.3■□□□□ 0.68
HOXC13P31276 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.3■□□□□ 0.68
HOXC13P31276 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HOXC13P31276 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HOXC13P31276 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.3■□□□□ 0.68
HOXC13P31276 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXC13P31276 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXC13P31276 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.3■□□□□ 0.68
HOXC13P31276 Z98044.1-201ENST00000632503 1764 ntBASIC19.29■□□□□ 0.68
HOXC13P31276 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC13P31276 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.29■□□□□ 0.68
HOXC13P31276 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.29■□□□□ 0.68
HOXC13P31276 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
HOXC13P31276 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HOXC13P31276 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC13P31276 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC13P31276 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC13P31276 STARP1-201ENST00000397973 869 ntBASIC19.29■□□□□ 0.68
HOXC13P31276 AP000523.1-201ENST00000398242 1049 ntBASIC19.29■□□□□ 0.68
HOXC13P31276 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC13P31276 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.29■□□□□ 0.68
HOXC13P31276 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.29■□□□□ 0.68
HOXC13P31276 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.29■□□□□ 0.68
HOXC13P31276 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.29■□□□□ 0.68
HOXC13P31276 CR769767.2-201ENST00000622735 460 ntBASIC19.29■□□□□ 0.68
HOXC13P31276 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.29■□□□□ 0.68
HOXC13P31276 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC13P31276 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
HOXC13P31276 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.29■□□□□ 0.68
HOXC13P31276 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC13P31276 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.29■□□□□ 0.68
HOXC13P31276 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC13P31276 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
HOXC13P31276 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC13P31276 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.28■□□□□ 0.68
HOXC13P31276 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC13P31276 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
HOXC13P31276 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC13P31276 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.28■□□□□ 0.68
HOXC13P31276 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC13P31276 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC13P31276 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.28■□□□□ 0.68
HOXC13P31276 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.28■□□□□ 0.68
HOXC13P31276 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC13P31276 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
HOXC13P31276 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC13P31276 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.28■□□□□ 0.68
HOXC13P31276 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC13P31276 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
HOXC13P31276 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC13P31276 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC13P31276 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.28■□□□□ 0.68
HOXC13P31276 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
HOXC13P31276 AC093503.3-201ENST00000624917 2352 ntBASIC19.28■□□□□ 0.68
HOXC13P31276 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC13P31276 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
HOXC13P31276 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC13P31276 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HOXC13P31276 AL357033.4-201ENST00000617703 1807 ntBASIC19.28■□□□□ 0.68
HOXC13P31276 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC13P31276 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC13P31276 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC13P31276 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC13P31276 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC13P31276 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC13P31276 MIR564-202ENST00000385049 94 ntBASIC19.27■□□□□ 0.68
HOXC13P31276 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC13P31276 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.27■□□□□ 0.68
HOXC13P31276 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC13P31276 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
HOXC13P31276 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC13P31276 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.27■□□□□ 0.68
HOXC13P31276 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.27■□□□□ 0.68
HOXC13P31276 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
HOXC13P31276 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC13P31276 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.27■□□□□ 0.68
HOXC13P31276 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.27■□□□□ 0.68
HOXC13P31276 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.27■□□□□ 0.67
HOXC13P31276 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HOXC13P31276 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HOXC13P31276 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
HOXC13P31276 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.26■□□□□ 0.67
HOXC13P31276 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC13P31276 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.26■□□□□ 0.67
HOXC13P31276 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC13P31276 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HOXC13P31276 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.26■□□□□ 0.67
HOXC13P31276 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC13P31276 AL845331.1-201ENST00000424978 1190 ntBASIC19.26■□□□□ 0.67
HOXC13P31276 KRT18P41-201ENST00000518924 1277 ntBASIC19.26■□□□□ 0.67
HOXC13P31276 RN7SL510P-201ENST00000581311 263 ntBASIC19.26■□□□□ 0.67
HOXC13P31276 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC13P31276 AC087289.5-201ENST00000586076 3175 ntBASIC19.26■□□□□ 0.67
HOXC13P31276 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC13P31276 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.26■□□□□ 0.67
HOXC13P31276 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC13P31276 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms