Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBL4AP11441 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBL4AP11441 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.26■□□□□ 0.35
UBL4AP11441 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.26■□□□□ 0.35
UBL4AP11441 AP005242.2-201ENST00000580065 1175 ntBASIC17.26■□□□□ 0.35
UBL4AP11441 MIR4497-201ENST00000583208 89 ntBASIC17.26■□□□□ 0.35
UBL4AP11441 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
UBL4AP11441 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
UBL4AP11441 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
UBL4AP11441 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBL4AP11441 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBL4AP11441 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.26■□□□□ 0.35
UBL4AP11441 HEIH-201ENST00000623091 1652 ntBASIC17.26■□□□□ 0.35
UBL4AP11441 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBL4AP11441 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBL4AP11441 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBL4AP11441 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.25■□□□□ 0.35
UBL4AP11441 AL031598.1-201ENST00000561511 1773 ntBASIC17.25■□□□□ 0.35
UBL4AP11441 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBL4AP11441 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.25■□□□□ 0.35
UBL4AP11441 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
UBL4AP11441 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBL4AP11441 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
UBL4AP11441 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBL4AP11441 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBL4AP11441 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBL4AP11441 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.25■□□□□ 0.35
UBL4AP11441 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBL4AP11441 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBL4AP11441 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBL4AP11441 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBL4AP11441 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.25■□□□□ 0.35
UBL4AP11441 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
UBL4AP11441 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
UBL4AP11441 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.25■□□□□ 0.35
UBL4AP11441 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.25■□□□□ 0.35
UBL4AP11441 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBL4AP11441 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBL4AP11441 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.25■□□□□ 0.35
UBL4AP11441 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
UBL4AP11441 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBL4AP11441 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBL4AP11441 KRT8P32-201ENST00000512863 1461 ntBASIC17.24■□□□□ 0.35
UBL4AP11441 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBL4AP11441 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBL4AP11441 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBL4AP11441 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
UBL4AP11441 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBL4AP11441 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBL4AP11441 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.24■□□□□ 0.35
UBL4AP11441 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBL4AP11441 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.24■□□□□ 0.35
UBL4AP11441 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBL4AP11441 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.24■□□□□ 0.35
UBL4AP11441 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.24■□□□□ 0.35
UBL4AP11441 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.24■□□□□ 0.35
UBL4AP11441 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.24■□□□□ 0.35
UBL4AP11441 BCL2-203ENST00000589955 5011 ntBASIC17.24■□□□□ 0.35
UBL4AP11441 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBL4AP11441 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
UBL4AP11441 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
UBL4AP11441 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBL4AP11441 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBL4AP11441 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBL4AP11441 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.24■□□□□ 0.35
UBL4AP11441 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.24■□□□□ 0.35
UBL4AP11441 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBL4AP11441 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.24■□□□□ 0.35
UBL4AP11441 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.24■□□□□ 0.35
UBL4AP11441 AC093827.2-201ENST00000512654 315 ntBASIC17.24■□□□□ 0.35
UBL4AP11441 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBL4AP11441 AP000525.1-201ENST00000608286 694 ntBASIC17.24■□□□□ 0.35
UBL4AP11441 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBL4AP11441 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.24■□□□□ 0.35
UBL4AP11441 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
UBL4AP11441 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
UBL4AP11441 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBL4AP11441 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
UBL4AP11441 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBL4AP11441 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
UBL4AP11441 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
UBL4AP11441 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.23■□□□□ 0.35
UBL4AP11441 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBL4AP11441 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.23■□□□□ 0.35
UBL4AP11441 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
UBL4AP11441 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBL4AP11441 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBL4AP11441 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.23■□□□□ 0.35
UBL4AP11441 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBL4AP11441 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBL4AP11441 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBL4AP11441 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
UBL4AP11441 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBL4AP11441 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
UBL4AP11441 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBL4AP11441 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.23■□□□□ 0.35
UBL4AP11441 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.23■□□□□ 0.35
UBL4AP11441 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBL4AP11441 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBL4AP11441 CA15P1-201ENST00000481698 905 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms