Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.9■□□□□ 0.62
HLA-DQB2P05538 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQB2P05538 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQB2P05538 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQB2P05538 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQB2P05538 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
HLA-DQB2P05538 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQB2P05538 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.9■□□□□ 0.62
HLA-DQB2P05538 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
HLA-DQB2P05538 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.9■□□□□ 0.62
HLA-DQB2P05538 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQB2P05538 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.9■□□□□ 0.62
HLA-DQB2P05538 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.9■□□□□ 0.62
HLA-DQB2P05538 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQB2P05538 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.9■□□□□ 0.62
HLA-DQB2P05538 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQB2P05538 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQB2P05538 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQB2P05538 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQB2P05538 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.9■□□□□ 0.62
HLA-DQB2P05538 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.9■□□□□ 0.62
HLA-DQB2P05538 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.9■□□□□ 0.62
HLA-DQB2P05538 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
HLA-DQB2P05538 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.89■□□□□ 0.62
HLA-DQB2P05538 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HLA-DQB2P05538 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 SLC25A3P1-201ENST00000443844 931 ntBASIC18.89■□□□□ 0.61
HLA-DQB2P05538 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 MYC-208ENST00000641036 567 ntBASIC18.89■□□□□ 0.61
HLA-DQB2P05538 AC097493.4-201ENST00000641197 219 ntBASIC18.89■□□□□ 0.61
HLA-DQB2P05538 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 KRT8P50-201ENST00000562022 1438 ntBASIC18.89■□□□□ 0.61
HLA-DQB2P05538 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQB2P05538 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 AC073592.3-201ENST00000625118 1834 ntBASIC18.88■□□□□ 0.61
HLA-DQB2P05538 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 AC090164.3-201ENST00000610780 2143 ntBASIC18.88■□□□□ 0.61
HLA-DQB2P05538 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 AC009947.2-201ENST00000444014 672 ntBASIC18.88■□□□□ 0.61
HLA-DQB2P05538 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HLA-DQB2P05538 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQB2P05538 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.87■□□□□ 0.61
HLA-DQB2P05538 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.87■□□□□ 0.61
HLA-DQB2P05538 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQB2P05538 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms