Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.13■□□□□ 0.81
TIMP1P01033 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.13■□□□□ 0.81
TIMP1P01033 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.13■□□□□ 0.81
TIMP1P01033 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TIMP1P01033 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TIMP1P01033 AC027601.4-201ENST00000611259 610 ntBASIC20.13■□□□□ 0.81
TIMP1P01033 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.13■□□□□ 0.81
TIMP1P01033 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.13■□□□□ 0.81
TIMP1P01033 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
TIMP1P01033 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TIMP1P01033 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TIMP1P01033 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TIMP1P01033 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.12■□□□□ 0.81
TIMP1P01033 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TIMP1P01033 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TIMP1P01033 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.12■□□□□ 0.81
TIMP1P01033 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TIMP1P01033 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.12■□□□□ 0.81
TIMP1P01033 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TIMP1P01033 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TIMP1P01033 IGHV3-22-201ENST00000520721 359 ntBASIC20.12■□□□□ 0.81
TIMP1P01033 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.12■□□□□ 0.81
TIMP1P01033 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.12■□□□□ 0.81
TIMP1P01033 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.12■□□□□ 0.81
TIMP1P01033 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.12■□□□□ 0.81
TIMP1P01033 AL139424.1-201ENST00000607572 797 ntBASIC20.12■□□□□ 0.81
TIMP1P01033 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.12■□□□□ 0.81
TIMP1P01033 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.12■□□□□ 0.81
TIMP1P01033 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TIMP1P01033 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TIMP1P01033 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TIMP1P01033 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.12■□□□□ 0.81
TIMP1P01033 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.12■□□□□ 0.81
TIMP1P01033 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TIMP1P01033 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.12■□□□□ 0.81
TIMP1P01033 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TIMP1P01033 TP73-AS1-210ENST00000637775 1455 ntBASIC20.11■□□□□ 0.81
TIMP1P01033 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TIMP1P01033 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TIMP1P01033 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TIMP1P01033 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.11■□□□□ 0.81
TIMP1P01033 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TIMP1P01033 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.11■□□□□ 0.81
TIMP1P01033 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TIMP1P01033 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TIMP1P01033 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.11■□□□□ 0.81
TIMP1P01033 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TIMP1P01033 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TIMP1P01033 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TIMP1P01033 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.11■□□□□ 0.81
TIMP1P01033 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TIMP1P01033 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TIMP1P01033 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TIMP1P01033 UPF3AP3-201ENST00000420996 769 ntBASIC20.11■□□□□ 0.81
TIMP1P01033 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.11■□□□□ 0.81
TIMP1P01033 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.11■□□□□ 0.81
TIMP1P01033 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.11■□□□□ 0.81
TIMP1P01033 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.11■□□□□ 0.81
TIMP1P01033 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.11■□□□□ 0.81
TIMP1P01033 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.11■□□□□ 0.81
TIMP1P01033 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TIMP1P01033 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.11■□□□□ 0.81
TIMP1P01033 FAM197Y3-203ENST00000618346 717 ntBASIC20.11■□□□□ 0.81
TIMP1P01033 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TIMP1P01033 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TIMP1P01033 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TIMP1P01033 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TIMP1P01033 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.11■□□□□ 0.81
TIMP1P01033 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
TIMP1P01033 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TIMP1P01033 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TIMP1P01033 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TIMP1P01033 AC104109.2-201ENST00000602919 1418 ntBASIC20.1■□□□□ 0.81
TIMP1P01033 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TIMP1P01033 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TIMP1P01033 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TIMP1P01033 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
TIMP1P01033 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TIMP1P01033 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.1■□□□□ 0.81
TIMP1P01033 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.1■□□□□ 0.81
TIMP1P01033 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.1■□□□□ 0.81
TIMP1P01033 AL355385.1-201ENST00000606123 409 ntBASIC20.1■□□□□ 0.81
TIMP1P01033 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
TIMP1P01033 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TIMP1P01033 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TIMP1P01033 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TIMP1P01033 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TIMP1P01033 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.09■□□□□ 0.81
TIMP1P01033 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
TIMP1P01033 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TIMP1P01033 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TIMP1P01033 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.09■□□□□ 0.81
TIMP1P01033 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TIMP1P01033 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.09■□□□□ 0.81
TIMP1P01033 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.09■□□□□ 0.81
TIMP1P01033 PMS2P2-201ENST00000425039 1128 ntBASIC20.09■□□□□ 0.81
TIMP1P01033 AC098831.1-202ENST00000438821 336 ntBASIC20.09■□□□□ 0.81
TIMP1P01033 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TIMP1P01033 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TIMP1P01033 AP001269.4-201ENST00000609611 512 ntBASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms