Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRUB2O95900 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
TRUB2O95900 AC036111.1-201ENST00000533973 1582 ntBASIC19.53■□□□□ 0.72
TRUB2O95900 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
TRUB2O95900 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRUB2O95900 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRUB2O95900 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRUB2O95900 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRUB2O95900 NEFHP1-201ENST00000412845 2629 ntBASIC19.53■□□□□ 0.72
TRUB2O95900 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRUB2O95900 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.53■□□□□ 0.72
TRUB2O95900 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.53■□□□□ 0.72
TRUB2O95900 ATP5G1P1-201ENST00000448724 379 ntBASIC19.53■□□□□ 0.72
TRUB2O95900 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRUB2O95900 WWOX-216ENST00000569818 525 ntBASIC19.53■□□□□ 0.72
TRUB2O95900 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.53■□□□□ 0.72
TRUB2O95900 AL138966.2-201ENST00000621997 464 ntBASIC19.53■□□□□ 0.72
TRUB2O95900 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRUB2O95900 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRUB2O95900 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRUB2O95900 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRUB2O95900 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRUB2O95900 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.53■□□□□ 0.72
TRUB2O95900 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.53■□□□□ 0.72
TRUB2O95900 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.53■□□□□ 0.72
TRUB2O95900 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.53■□□□□ 0.72
TRUB2O95900 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRUB2O95900 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TRUB2O95900 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRUB2O95900 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.53■□□□□ 0.72
TRUB2O95900 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRUB2O95900 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TRUB2O95900 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRUB2O95900 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRUB2O95900 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.53■□□□□ 0.72
TRUB2O95900 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
TRUB2O95900 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB2O95900 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TRUB2O95900 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB2O95900 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.52■□□□□ 0.72
TRUB2O95900 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.52■□□□□ 0.72
TRUB2O95900 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.52■□□□□ 0.72
TRUB2O95900 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB2O95900 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB2O95900 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.52■□□□□ 0.72
TRUB2O95900 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB2O95900 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.52■□□□□ 0.72
TRUB2O95900 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB2O95900 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.52■□□□□ 0.72
TRUB2O95900 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB2O95900 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB2O95900 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB2O95900 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB2O95900 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB2O95900 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TRUB2O95900 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB2O95900 AL499627.1-201ENST00000569373 2188 ntBASIC19.52■□□□□ 0.72
TRUB2O95900 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB2O95900 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB2O95900 RCN1P1-201ENST00000400413 996 ntBASIC19.52■□□□□ 0.72
TRUB2O95900 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TRUB2O95900 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB2O95900 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
TRUB2O95900 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.52■□□□□ 0.72
TRUB2O95900 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB2O95900 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB2O95900 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB2O95900 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB2O95900 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRUB2O95900 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TRUB2O95900 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.52■□□□□ 0.71
TRUB2O95900 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.52■□□□□ 0.71
TRUB2O95900 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.51■□□□□ 0.71
TRUB2O95900 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB2O95900 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
TRUB2O95900 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB2O95900 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.51■□□□□ 0.71
TRUB2O95900 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.51■□□□□ 0.71
TRUB2O95900 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.51■□□□□ 0.71
TRUB2O95900 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TRUB2O95900 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB2O95900 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.51■□□□□ 0.71
TRUB2O95900 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB2O95900 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB2O95900 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB2O95900 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.51■□□□□ 0.71
TRUB2O95900 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB2O95900 KRT18P57-201ENST00000443599 1254 ntBASIC19.51■□□□□ 0.71
TRUB2O95900 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB2O95900 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB2O95900 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.51■□□□□ 0.71
TRUB2O95900 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB2O95900 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB2O95900 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.51■□□□□ 0.71
TRUB2O95900 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB2O95900 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB2O95900 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.51■□□□□ 0.71
TRUB2O95900 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB2O95900 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB2O95900 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms