Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC29.03■■■□□ 2.24
PCF11O94913 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC29.03■■■□□ 2.24
PCF11O94913 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC29.03■■■□□ 2.24
PCF11O94913 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
PCF11O94913 AKR1C7P-201ENST00000305623 895 ntBASIC29.03■■■□□ 2.24
PCF11O94913 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
PCF11O94913 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
PCF11O94913 CDV3-207ENST00000508481 661 ntTSL 3 BASIC29.03■■■□□ 2.24
PCF11O94913 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
PCF11O94913 REEP1-209ENST00000541910 969 ntTSL 2 BASIC29.03■■■□□ 2.24
PCF11O94913 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC29.03■■■□□ 2.24
PCF11O94913 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC29.03■■■□□ 2.24
PCF11O94913 IL11-204ENST00000590625 1028 ntTSL 2 BASIC29.03■■■□□ 2.24
PCF11O94913 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
PCF11O94913 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
PCF11O94913 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC29.03■■■□□ 2.24
PCF11O94913 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC29.03■■■□□ 2.24
PCF11O94913 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC29.03■■■□□ 2.24
PCF11O94913 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
PCF11O94913 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC29.03■■■□□ 2.24
PCF11O94913 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
PCF11O94913 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
PCF11O94913 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
PCF11O94913 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
PCF11O94913 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC29.02■■■□□ 2.24
PCF11O94913 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
PCF11O94913 KRT18P13-201ENST00000400056 1290 ntBASIC29.02■■■□□ 2.24
PCF11O94913 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
PCF11O94913 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC29.02■■■□□ 2.24
PCF11O94913 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
PCF11O94913 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC29.02■■■□□ 2.24
PCF11O94913 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC29.02■■■□□ 2.24
PCF11O94913 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
PCF11O94913 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
PCF11O94913 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC29.02■■■□□ 2.24
PCF11O94913 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC29.01■■■□□ 2.24
PCF11O94913 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
PCF11O94913 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC29.01■■■□□ 2.24
PCF11O94913 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
PCF11O94913 AC104692.2-201ENST00000603054 253 ntBASIC29.01■■■□□ 2.24
PCF11O94913 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC29.01■■■□□ 2.24
PCF11O94913 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.23
PCF11O94913 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.23
PCF11O94913 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC29.01■■■□□ 2.23
PCF11O94913 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
PCF11O94913 SNAI3-AS1-205ENST00000568633 2096 ntBASIC29.01■■■□□ 2.23
PCF11O94913 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC29.01■■■□□ 2.23
PCF11O94913 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
PCF11O94913 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC29.01■■■□□ 2.23
PCF11O94913 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC29.01■■■□□ 2.23
PCF11O94913 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC29.01■■■□□ 2.23
PCF11O94913 AC104819.1-201ENST00000504587 486 ntBASIC29.01■■■□□ 2.23
PCF11O94913 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC29.01■■■□□ 2.23
PCF11O94913 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC29.01■■■□□ 2.23
PCF11O94913 AC009065.1-201ENST00000564055 1225 ntBASIC29.01■■■□□ 2.23
PCF11O94913 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC29.01■■■□□ 2.23
PCF11O94913 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
PCF11O94913 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC29■■■□□ 2.23
PCF11O94913 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
PCF11O94913 EMBP1-201ENST00000458200 901 ntBASIC29■■■□□ 2.23
PCF11O94913 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC29■■■□□ 2.23
PCF11O94913 AC092183.1-201ENST00000469884 875 ntBASIC29■■■□□ 2.23
PCF11O94913 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC29■■■□□ 2.23
PCF11O94913 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC29■■■□□ 2.23
PCF11O94913 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
PCF11O94913 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
PCF11O94913 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC28.99■■■□□ 2.23
PCF11O94913 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC28.99■■■□□ 2.23
PCF11O94913 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC28.99■■■□□ 2.23
PCF11O94913 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC28.99■■■□□ 2.23
PCF11O94913 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
PCF11O94913 HES2-202ENST00000377836 507 ntTSL 2 BASIC28.99■■■□□ 2.23
PCF11O94913 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC28.99■■■□□ 2.23
PCF11O94913 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC28.99■■■□□ 2.23
PCF11O94913 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC28.99■■■□□ 2.23
PCF11O94913 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC28.99■■■□□ 2.23
PCF11O94913 SLC25A6P4-201ENST00000586535 553 ntBASIC28.99■■■□□ 2.23
PCF11O94913 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
PCF11O94913 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
PCF11O94913 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
PCF11O94913 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC28.99■■■□□ 2.23
PCF11O94913 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
PCF11O94913 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
PCF11O94913 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
PCF11O94913 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
PCF11O94913 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC28.98■■■□□ 2.23
PCF11O94913 NUS1P1-201ENST00000446295 882 ntBASIC28.98■■■□□ 2.23
PCF11O94913 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC28.98■■■□□ 2.23
PCF11O94913 BMF-207ENST00000559701 630 ntTSL 3 BASIC28.98■■■□□ 2.23
PCF11O94913 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
PCF11O94913 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC28.98■■■□□ 2.23
PCF11O94913 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
PCF11O94913 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC28.98■■■□□ 2.23
PCF11O94913 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
PCF11O94913 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC28.98■■■□□ 2.23
PCF11O94913 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
PCF11O94913 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
PCF11O94913 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC28.97■■■□□ 2.23
PCF11O94913 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC28.97■■■□□ 2.23
PCF11O94913 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC28.97■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms