Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.79■□□□□ 0.28
ZIC3O60481 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.79■□□□□ 0.28
ZIC3O60481 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.79■□□□□ 0.28
ZIC3O60481 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.79■□□□□ 0.28
ZIC3O60481 AC098818.2-201ENST00000564925 2320 ntBASIC16.79■□□□□ 0.28
ZIC3O60481 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.79■□□□□ 0.28
ZIC3O60481 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.79■□□□□ 0.28
ZIC3O60481 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZIC3O60481 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
ZIC3O60481 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ZIC3O60481 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ZIC3O60481 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZIC3O60481 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZIC3O60481 AL031133.1-201ENST00000406807 723 ntBASIC16.78■□□□□ 0.28
ZIC3O60481 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZIC3O60481 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.78■□□□□ 0.28
ZIC3O60481 AC034232.1-201ENST00000506026 1064 ntBASIC16.78■□□□□ 0.28
ZIC3O60481 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZIC3O60481 MIR3917-201ENST00000580971 93 ntBASIC16.78■□□□□ 0.28
ZIC3O60481 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ZIC3O60481 AC010240.3-201ENST00000607688 395 ntBASIC16.78■□□□□ 0.28
ZIC3O60481 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.78■□□□□ 0.28
ZIC3O60481 HYMAI.1-201ENST00000620949 238 ntBASIC16.78■□□□□ 0.28
ZIC3O60481 AL157888.1-201ENST00000631930 593 ntBASIC16.78■□□□□ 0.28
ZIC3O60481 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.78■□□□□ 0.28
ZIC3O60481 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
ZIC3O60481 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZIC3O60481 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZIC3O60481 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZIC3O60481 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZIC3O60481 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
ZIC3O60481 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZIC3O60481 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZIC3O60481 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ZIC3O60481 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZIC3O60481 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.77■□□□□ 0.28
ZIC3O60481 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZIC3O60481 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZIC3O60481 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ZIC3O60481 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZIC3O60481 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZIC3O60481 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ZIC3O60481 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.77■□□□□ 0.28
ZIC3O60481 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ZIC3O60481 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ZIC3O60481 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ZIC3O60481 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ZIC3O60481 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ZIC3O60481 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ZIC3O60481 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ZIC3O60481 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ZIC3O60481 AL031598.1-201ENST00000561511 1773 ntBASIC16.77■□□□□ 0.27
ZIC3O60481 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.77■□□□□ 0.27
ZIC3O60481 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
ZIC3O60481 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ZIC3O60481 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.76■□□□□ 0.27
ZIC3O60481 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZIC3O60481 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ZIC3O60481 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZIC3O60481 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZIC3O60481 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZIC3O60481 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.76■□□□□ 0.27
ZIC3O60481 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.76■□□□□ 0.27
ZIC3O60481 AP000593.1-201ENST00000393668 712 ntBASIC16.76■□□□□ 0.27
ZIC3O60481 AC112907.2-201ENST00000448639 330 ntBASIC16.76■□□□□ 0.27
ZIC3O60481 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZIC3O60481 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.76■□□□□ 0.27
ZIC3O60481 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.76■□□□□ 0.27
ZIC3O60481 MIR3180-4-201ENST00000582223 153 ntBASIC16.76■□□□□ 0.27
ZIC3O60481 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.76■□□□□ 0.27
ZIC3O60481 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZIC3O60481 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
ZIC3O60481 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZIC3O60481 AL499627.1-201ENST00000569373 2188 ntBASIC16.76■□□□□ 0.27
ZIC3O60481 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.76■□□□□ 0.27
ZIC3O60481 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZIC3O60481 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZIC3O60481 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
ZIC3O60481 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZIC3O60481 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZIC3O60481 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZIC3O60481 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZIC3O60481 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZIC3O60481 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ZIC3O60481 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZIC3O60481 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.75■□□□□ 0.27
ZIC3O60481 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
ZIC3O60481 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ZIC3O60481 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.75■□□□□ 0.27
ZIC3O60481 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZIC3O60481 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZIC3O60481 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZIC3O60481 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ZIC3O60481 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ZIC3O60481 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
ZIC3O60481 AL671277.2-201ENST00000458060 996 ntBASIC16.75■□□□□ 0.27
ZIC3O60481 AC092597.1-201ENST00000487352 616 ntBASIC16.75■□□□□ 0.27
ZIC3O60481 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.75■□□□□ 0.27
ZIC3O60481 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.75■□□□□ 0.27
ZIC3O60481 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms