Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PHGDHO43175 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.58■□□□□ 0.56
PHGDHO43175 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PHGDHO43175 AL353807.1-201ENST00000427475 662 ntBASIC18.58■□□□□ 0.56
PHGDHO43175 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PHGDHO43175 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.58■□□□□ 0.56
PHGDHO43175 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.58■□□□□ 0.56
PHGDHO43175 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.58■□□□□ 0.56
PHGDHO43175 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.58■□□□□ 0.56
PHGDHO43175 AF186192.3-201ENST00000583427 947 ntBASIC18.58■□□□□ 0.56
PHGDHO43175 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PHGDHO43175 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.58■□□□□ 0.56
PHGDHO43175 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PHGDHO43175 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PHGDHO43175 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PHGDHO43175 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PHGDHO43175 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PHGDHO43175 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PHGDHO43175 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.58■□□□□ 0.56
PHGDHO43175 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PHGDHO43175 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
PHGDHO43175 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHGDHO43175 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHGDHO43175 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.57■□□□□ 0.56
PHGDHO43175 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.57■□□□□ 0.56
PHGDHO43175 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.57■□□□□ 0.56
PHGDHO43175 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.57■□□□□ 0.56
PHGDHO43175 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHGDHO43175 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHGDHO43175 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHGDHO43175 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHGDHO43175 AC011506.1-201ENST00000474329 610 ntBASIC18.57■□□□□ 0.56
PHGDHO43175 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PHGDHO43175 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.57■□□□□ 0.56
PHGDHO43175 AL031985.4-201ENST00000642138 673 ntBASIC18.57■□□□□ 0.56
PHGDHO43175 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.57■□□□□ 0.56
PHGDHO43175 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PHGDHO43175 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHGDHO43175 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHGDHO43175 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHGDHO43175 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHGDHO43175 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHGDHO43175 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHGDHO43175 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.57■□□□□ 0.56
PHGDHO43175 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PHGDHO43175 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PHGDHO43175 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.57■□□□□ 0.56
PHGDHO43175 ABALON-201ENST00000629058 1903 ntBASIC18.57■□□□□ 0.56
PHGDHO43175 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHGDHO43175 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PHGDHO43175 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.56■□□□□ 0.56
PHGDHO43175 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
PHGDHO43175 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.56■□□□□ 0.56
PHGDHO43175 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PHGDHO43175 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHGDHO43175 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.56■□□□□ 0.56
PHGDHO43175 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHGDHO43175 RCC2P3-201ENST00000418112 1537 ntBASIC18.56■□□□□ 0.56
PHGDHO43175 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.56■□□□□ 0.56
PHGDHO43175 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHGDHO43175 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PHGDHO43175 AC026271.3-201ENST00000571884 352 ntBASIC18.56■□□□□ 0.56
PHGDHO43175 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHGDHO43175 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.56■□□□□ 0.56
PHGDHO43175 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PHGDHO43175 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHGDHO43175 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PHGDHO43175 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PHGDHO43175 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHGDHO43175 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PHGDHO43175 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PHGDHO43175 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.55■□□□□ 0.56
PHGDHO43175 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHGDHO43175 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PHGDHO43175 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHGDHO43175 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.55■□□□□ 0.56
PHGDHO43175 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
PHGDHO43175 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PHGDHO43175 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHGDHO43175 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHGDHO43175 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.55■□□□□ 0.56
PHGDHO43175 FAM207BP-201ENST00000447172 505 ntBASIC18.55■□□□□ 0.56
PHGDHO43175 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
PHGDHO43175 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.55■□□□□ 0.56
PHGDHO43175 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.55■□□□□ 0.56
PHGDHO43175 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.55■□□□□ 0.56
PHGDHO43175 RARRES2P10-201ENST00000564312 460 ntBASIC18.55■□□□□ 0.56
PHGDHO43175 CKBP1-201ENST00000565489 1086 ntBASIC18.55■□□□□ 0.56
PHGDHO43175 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.55■□□□□ 0.56
PHGDHO43175 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.55■□□□□ 0.56
PHGDHO43175 AC073195.1-201ENST00000607241 877 ntBASIC18.55■□□□□ 0.56
PHGDHO43175 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.55■□□□□ 0.56
PHGDHO43175 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PHGDHO43175 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PHGDHO43175 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.55■□□□□ 0.56
PHGDHO43175 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.55■□□□□ 0.56
PHGDHO43175 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHGDHO43175 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHGDHO43175 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHGDHO43175 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms