Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 DRAXINP1-201ENST00000437611 948 ntBASIC21.35■■□□□ 1.01
ATP2A1O14983 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.35■■□□□ 1.01
ATP2A1O14983 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.35■■□□□ 1.01
ATP2A1O14983 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.35■■□□□ 1.01
ATP2A1O14983 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ATP2A1O14983 AL691432.3-201ENST00000621860 400 ntBASIC21.35■■□□□ 1.01
ATP2A1O14983 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
ATP2A1O14983 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.35■■□□□ 1.01
ATP2A1O14983 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATP2A1O14983 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.35■■□□□ 1.01
ATP2A1O14983 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
ATP2A1O14983 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATP2A1O14983 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.35■■□□□ 1.01
ATP2A1O14983 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.34■■□□□ 1.01
ATP2A1O14983 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2A1O14983 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2A1O14983 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2A1O14983 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2A1O14983 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2A1O14983 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.34■■□□□ 1.01
ATP2A1O14983 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2A1O14983 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2A1O14983 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2A1O14983 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2A1O14983 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2A1O14983 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2A1O14983 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.34■■□□□ 1.01
ATP2A1O14983 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2A1O14983 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2A1O14983 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.34■■□□□ 1.01
ATP2A1O14983 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2A1O14983 PCDHAC2-203ENST00000615316 3011 ntBASIC21.34■■□□□ 1.01
ATP2A1O14983 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
ATP2A1O14983 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP2A1O14983 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.33■■□□□ 1.01
ATP2A1O14983 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.33■■□□□ 1.01
ATP2A1O14983 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
ATP2A1O14983 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
ATP2A1O14983 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP2A1O14983 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP2A1O14983 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
ATP2A1O14983 NUS1P1-201ENST00000446295 882 ntBASIC21.33■■□□□ 1.01
ATP2A1O14983 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.33■■□□□ 1.01
ATP2A1O14983 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.33■■□□□ 1.01
ATP2A1O14983 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
ATP2A1O14983 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.33■■□□□ 1.01
ATP2A1O14983 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ATP2A1O14983 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.33■■□□□ 1.01
ATP2A1O14983 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ATP2A1O14983 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP2A1O14983 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ATP2A1O14983 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ATP2A1O14983 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
ATP2A1O14983 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ATP2A1O14983 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATP2A1O14983 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP2A1O14983 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP2A1O14983 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATP2A1O14983 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.32■■□□□ 1
ATP2A1O14983 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.32■■□□□ 1
ATP2A1O14983 AL032819.2-201ENST00000624543 2162 ntBASIC21.32■■□□□ 1
ATP2A1O14983 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.32■■□□□ 1
ATP2A1O14983 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP2A1O14983 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP2A1O14983 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
ATP2A1O14983 KRT18P41-201ENST00000518924 1277 ntBASIC21.32■■□□□ 1
ATP2A1O14983 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.32■■□□□ 1
ATP2A1O14983 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.32■■□□□ 1
ATP2A1O14983 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ATP2A1O14983 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.32■■□□□ 1
ATP2A1O14983 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ATP2A1O14983 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.32■■□□□ 1
ATP2A1O14983 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ATP2A1O14983 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP2A1O14983 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP2A1O14983 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.32■■□□□ 1
ATP2A1O14983 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
ATP2A1O14983 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.31■■□□□ 1
ATP2A1O14983 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP2A1O14983 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP2A1O14983 HEIH-201ENST00000623091 1652 ntBASIC21.31■■□□□ 1
ATP2A1O14983 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.31■■□□□ 1
ATP2A1O14983 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.31■■□□□ 1
ATP2A1O14983 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
ATP2A1O14983 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP2A1O14983 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP2A1O14983 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.31■■□□□ 1
ATP2A1O14983 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.31■■□□□ 1
ATP2A1O14983 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.31■■□□□ 1
ATP2A1O14983 TPSP2-201ENST00000561760 610 ntBASIC21.31■■□□□ 1
ATP2A1O14983 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.31■■□□□ 1
ATP2A1O14983 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
ATP2A1O14983 AC005332.3-201ENST00000589904 676 ntBASIC21.31■■□□□ 1
ATP2A1O14983 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.31■■□□□ 1
ATP2A1O14983 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.31■■□□□ 1
ATP2A1O14983 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.31■■□□□ 1
ATP2A1O14983 AL390719.2-201ENST00000606993 987 ntBASIC21.31■■□□□ 1
ATP2A1O14983 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.31■■□□□ 1
ATP2A1O14983 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATP2A1O14983 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms