Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
UPK1AO00322 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UPK1AO00322 AC116562.2-201ENST00000507042 360 ntBASIC17.71■□□□□ 0.43
UPK1AO00322 NUDT16P1-203ENST00000513809 620 ntBASIC17.71■□□□□ 0.43
UPK1AO00322 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.71■□□□□ 0.43
UPK1AO00322 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.71■□□□□ 0.43
UPK1AO00322 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UPK1AO00322 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UPK1AO00322 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPK1AO00322 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPK1AO00322 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UPK1AO00322 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.71■□□□□ 0.43
UPK1AO00322 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UPK1AO00322 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.71■□□□□ 0.43
UPK1AO00322 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UPK1AO00322 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
UPK1AO00322 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
UPK1AO00322 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
UPK1AO00322 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPK1AO00322 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
UPK1AO00322 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UPK1AO00322 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.7■□□□□ 0.42
UPK1AO00322 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.7■□□□□ 0.42
UPK1AO00322 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPK1AO00322 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.7■□□□□ 0.42
UPK1AO00322 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.7■□□□□ 0.42
UPK1AO00322 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UPK1AO00322 AC008550.1-201ENST00000511500 884 ntBASIC17.7■□□□□ 0.42
UPK1AO00322 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.7■□□□□ 0.42
UPK1AO00322 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.7■□□□□ 0.42
UPK1AO00322 CKBP1-201ENST00000565489 1086 ntBASIC17.7■□□□□ 0.42
UPK1AO00322 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.7■□□□□ 0.42
UPK1AO00322 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPK1AO00322 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.7■□□□□ 0.42
UPK1AO00322 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.7■□□□□ 0.42
UPK1AO00322 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPK1AO00322 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UPK1AO00322 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
UPK1AO00322 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.7■□□□□ 0.42
UPK1AO00322 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
UPK1AO00322 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.7■□□□□ 0.42
UPK1AO00322 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPK1AO00322 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UPK1AO00322 AC126763.1-201ENST00000552015 2118 ntBASIC17.69■□□□□ 0.42
UPK1AO00322 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.69■□□□□ 0.42
UPK1AO00322 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPK1AO00322 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.69■□□□□ 0.42
UPK1AO00322 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPK1AO00322 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPK1AO00322 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPK1AO00322 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.69■□□□□ 0.42
UPK1AO00322 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPK1AO00322 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
UPK1AO00322 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPK1AO00322 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.69■□□□□ 0.42
UPK1AO00322 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.69■□□□□ 0.42
UPK1AO00322 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
UPK1AO00322 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UPK1AO00322 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.69■□□□□ 0.42
UPK1AO00322 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.69■□□□□ 0.42
UPK1AO00322 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
UPK1AO00322 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.69■□□□□ 0.42
UPK1AO00322 AP000692.2-201ENST00000608391 879 ntBASIC17.69■□□□□ 0.42
UPK1AO00322 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.69■□□□□ 0.42
UPK1AO00322 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
UPK1AO00322 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPK1AO00322 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPK1AO00322 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.69■□□□□ 0.42
UPK1AO00322 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPK1AO00322 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
UPK1AO00322 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
UPK1AO00322 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
UPK1AO00322 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
UPK1AO00322 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UPK1AO00322 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.69■□□□□ 0.42
UPK1AO00322 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
UPK1AO00322 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.69■□□□□ 0.42
UPK1AO00322 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPK1AO00322 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.69■□□□□ 0.42
UPK1AO00322 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
UPK1AO00322 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1AO00322 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.68■□□□□ 0.42
UPK1AO00322 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1AO00322 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1AO00322 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
UPK1AO00322 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1AO00322 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1AO00322 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1AO00322 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.68■□□□□ 0.42
UPK1AO00322 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1AO00322 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1AO00322 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1AO00322 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
UPK1AO00322 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
UPK1AO00322 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1AO00322 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.68■□□□□ 0.42
UPK1AO00322 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
UPK1AO00322 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.68■□□□□ 0.42
UPK1AO00322 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
UPK1AO00322 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms