Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 RPL18-209ENST00000550645 463 ntTSL 5 BASIC25.24■■□□□ 1.63
SBNO1A3KN83 RPL18-214ENST00000552588 559 ntTSL 3 BASIC25.24■■□□□ 1.63
SBNO1A3KN83 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SBNO1A3KN83 AL591684.3-201ENST00000605187 298 ntBASIC25.24■■□□□ 1.63
SBNO1A3KN83 AC008608.2-201ENST00000606089 416 ntBASIC25.24■■□□□ 1.63
SBNO1A3KN83 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC25.24■■□□□ 1.63
SBNO1A3KN83 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SBNO1A3KN83 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC25.24■■□□□ 1.63
SBNO1A3KN83 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
SBNO1A3KN83 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC25.24■■□□□ 1.63
SBNO1A3KN83 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SBNO1A3KN83 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
SBNO1A3KN83 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC25.24■■□□□ 1.63
SBNO1A3KN83 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SBNO1A3KN83 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SBNO1A3KN83 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SBNO1A3KN83 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC25.23■■□□□ 1.63
SBNO1A3KN83 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SBNO1A3KN83 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC25.23■■□□□ 1.63
SBNO1A3KN83 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SBNO1A3KN83 CCS-201ENST00000310190 942 ntTSL 5 BASIC25.23■■□□□ 1.63
SBNO1A3KN83 IRF8-202ENST00000562492 946 ntTSL 3 BASIC25.23■■□□□ 1.63
SBNO1A3KN83 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
SBNO1A3KN83 MIR5100-201ENST00000579544 119 ntBASIC25.23■■□□□ 1.63
SBNO1A3KN83 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC25.23■■□□□ 1.63
SBNO1A3KN83 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
SBNO1A3KN83 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
SBNO1A3KN83 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SBNO1A3KN83 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SBNO1A3KN83 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SBNO1A3KN83 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SBNO1A3KN83 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC25.23■■□□□ 1.63
SBNO1A3KN83 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
SBNO1A3KN83 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SBNO1A3KN83 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SBNO1A3KN83 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SBNO1A3KN83 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC25.22■■□□□ 1.63
SBNO1A3KN83 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SBNO1A3KN83 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
SBNO1A3KN83 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC25.22■■□□□ 1.63
SBNO1A3KN83 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SBNO1A3KN83 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC25.22■■□□□ 1.63
SBNO1A3KN83 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC25.22■■□□□ 1.63
SBNO1A3KN83 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC25.22■■□□□ 1.63
SBNO1A3KN83 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SBNO1A3KN83 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC25.22■■□□□ 1.63
SBNO1A3KN83 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
SBNO1A3KN83 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SBNO1A3KN83 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SBNO1A3KN83 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC25.22■■□□□ 1.63
SBNO1A3KN83 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC25.22■■□□□ 1.63
SBNO1A3KN83 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC25.22■■□□□ 1.63
SBNO1A3KN83 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC25.22■■□□□ 1.63
SBNO1A3KN83 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SBNO1A3KN83 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SBNO1A3KN83 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SBNO1A3KN83 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SBNO1A3KN83 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SBNO1A3KN83 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC25.21■■□□□ 1.63
SBNO1A3KN83 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC25.21■■□□□ 1.63
SBNO1A3KN83 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC25.21■■□□□ 1.63
SBNO1A3KN83 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SBNO1A3KN83 FAM220CP-201ENST00000395253 831 ntBASIC25.21■■□□□ 1.63
SBNO1A3KN83 BX842568.4-201ENST00000421222 227 ntBASIC25.21■■□□□ 1.63
SBNO1A3KN83 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SBNO1A3KN83 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
SBNO1A3KN83 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC25.21■■□□□ 1.63
SBNO1A3KN83 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
SBNO1A3KN83 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC25.21■■□□□ 1.63
SBNO1A3KN83 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC25.21■■□□□ 1.63
SBNO1A3KN83 AL049840.3-201ENST00000602669 611 ntBASIC25.21■■□□□ 1.63
SBNO1A3KN83 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC25.21■■□□□ 1.63
SBNO1A3KN83 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SBNO1A3KN83 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC25.21■■□□□ 1.63
SBNO1A3KN83 PMS2P7-201ENST00000506558 1336 ntBASIC25.21■■□□□ 1.63
SBNO1A3KN83 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC25.21■■□□□ 1.63
SBNO1A3KN83 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
SBNO1A3KN83 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SBNO1A3KN83 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC25.21■■□□□ 1.63
SBNO1A3KN83 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.63
SBNO1A3KN83 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
SBNO1A3KN83 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC25.2■■□□□ 1.63
SBNO1A3KN83 AC093909.1-201ENST00000504731 1122 ntBASIC25.2■■□□□ 1.63
SBNO1A3KN83 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC25.2■■□□□ 1.63
SBNO1A3KN83 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC25.2■■□□□ 1.63
SBNO1A3KN83 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC25.2■■□□□ 1.63
SBNO1A3KN83 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
SBNO1A3KN83 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SBNO1A3KN83 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC25.2■■□□□ 1.62
SBNO1A3KN83 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SBNO1A3KN83 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SBNO1A3KN83 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SBNO1A3KN83 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SBNO1A3KN83 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC25.2■■□□□ 1.62
SBNO1A3KN83 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SBNO1A3KN83 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
SBNO1A3KN83 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC25.2■■□□□ 1.62
SBNO1A3KN83 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SBNO1A3KN83 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SBNO1A3KN83 HES2-202ENST00000377836 507 ntTSL 2 BASIC25.19■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms