Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 AC087623.3-201ENST00000607047 1098 ntBASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 HLA-B-256ENST00000639848 1089 ntBASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
DUXBA0A1W2PPF3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 AC120498.8-201ENST00000614275 531 ntBASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 AC092368.3-202ENST00000574180 1591 ntBASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.23■□□□□ 0.03
DUXBA0A1W2PPF3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 AC092118.2-201ENST00000613495 667 ntBASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 HLA-A-209ENST00000638375 975 ntBASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 AC008556.1-201ENST00000610908 2040 ntBASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms