Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHB11Q9Y5F2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB11Q9Y5F2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB11Q9Y5F2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB11Q9Y5F2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB11Q9Y5F2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB11Q9Y5F2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
PCDHB11Q9Y5F2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB11Q9Y5F2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB11Q9Y5F2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB11Q9Y5F2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHB11Q9Y5F2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB11Q9Y5F2 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB11Q9Y5F2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB11Q9Y5F2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB11Q9Y5F2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHB11Q9Y5F2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.29■□□□□ 0.52
PCDHB11Q9Y5F2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PCDHB11Q9Y5F2 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.29■□□□□ 0.52
PCDHB11Q9Y5F2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHB11Q9Y5F2 AL121956.5-201ENST00000625261 221 ntBASIC18.29■□□□□ 0.52
PCDHB11Q9Y5F2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB11Q9Y5F2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB11Q9Y5F2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHB11Q9Y5F2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB11Q9Y5F2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB11Q9Y5F2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PCDHB11Q9Y5F2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 AL138781.2-201ENST00000617896 1843 ntBASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 CROCCP3-202ENST00000420820 1947 ntBASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 AC011558.1-201ENST00000623459 338 ntBASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 KRT8P3-201ENST00000519669 1449 ntBASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHB11Q9Y5F2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB11Q9Y5F2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB11Q9Y5F2 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.27■□□□□ 0.52
PCDHB11Q9Y5F2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PCDHB11Q9Y5F2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB11Q9Y5F2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHB11Q9Y5F2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB11Q9Y5F2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHB11Q9Y5F2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB11Q9Y5F2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB11Q9Y5F2 AL049812.1-201ENST00000432563 2267 ntBASIC18.27■□□□□ 0.52
PCDHB11Q9Y5F2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB11Q9Y5F2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB11Q9Y5F2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB11Q9Y5F2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHB11Q9Y5F2 PCED1CP-201ENST00000419887 785 ntBASIC18.27■□□□□ 0.52
PCDHB11Q9Y5F2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHB11Q9Y5F2 AC009947.2-201ENST00000444014 672 ntBASIC18.27■□□□□ 0.52
PCDHB11Q9Y5F2 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PCDHB11Q9Y5F2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB11Q9Y5F2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms